DRSC/TRiP Functional Genomics Resources

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Protein Alignment key and Ikbkg

DIOPT Version :10

Sequence 1:NP_001246503.1 Gene:key / 37967 FlyBaseID:FBgn0041205 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_001129539.1 Gene:Ikbkg / 16151 MGIID:1338074 Length:430 Species:Mus musculus


Alignment Length:463 Identity:104/463 - (22%)
Similarity:175/463 - (37%) Gaps:142/463 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 CGNAQEAKETVASTSTQPPTVNCIPVSITASQQQHKSLDSGSSQQQSLATSFIMGEIQSDVLKNS 93
            |.:.|:. :|::....:.|..|.:...:..|        .|.::.|.:     :|| :|.:.|.:
Mouse     6 CCDDQDT-QTLSCWMNKHPWKNQLSEMVQPS--------GGPAEDQDM-----LGE-ESSLGKPA 55

  Fly    94 VYSQFPSLCSLQGSAEEVVKLQNMMTEYLALKSTLDKVNQTM------LNYHNLTQQWRQE---- 148
            :.    .|.|.||:.|   .||..:.|...|:..:.:.||.:      |.:..::|:..:|    
Mouse    56 ML----HLPSEQGTPE---TLQRCLEENQELRDAIRQSNQMLRERCEELLHFQVSQREEKEFLMC 113

  Fly   149 -------------------AADREHQYK--EHVKECQ-----------AQIAILRVENQELKRDL 181
                               .:.||...|  |.:|:||           ||:..|..|.||.:..|
Mouse   114 KFQEARKLVERLSLEKLDLRSQREQALKELEQLKKCQQQMAEDKASVKAQVTSLLGELQESQSRL 178

  Fly   182 E--TKIEQ-IEGVHTIRLKE-QDELRKSVSEKQSLIDNMRVEIDKLKQLNHSFEFVPEYATESKS 242
            |  ||..| :||    |::. .:::|:..||::.|.....|::|:|:..|.|.|.......::.|
Mouse   179 EAATKDRQALEG----RIRAVSEQVRQLESEREVLQQQHSVQVDQLRMQNQSVEAALRMERQAAS 239

  Fly   243 QE-------------------------------------------LIKKMQLDINELKARDIQKQ 264
            :|                                           |:.|.:| |::||....|.:
Mouse   240 EEKRKLAQLQAAYHQLFQDYDSHIKSSKGMQLEDLRQQLQQAEEALVAKQEL-IDKLKEEAEQHK 303

  Fly   265 ---EVIKGLQIQNDIYRRDFEMERADREKNAGEKDQYLMD-LRSLQRRNQELIEALAESHKASKA 325
               |.:..|:.|.|||:.||:.||..|||.. ||.:||.: |..|||          |.:|....
Mouse   304 IVMETVPVLKAQADIYKADFQAERHAREKLV-EKKEYLQEQLEQLQR----------EFNKLKVG 357

  Fly   326 CSTASPLSSSRSNLREEQRPVRILDPTGASSRTSDTTLR-----------CPICSKSFNALSVLQ 379
            |..::.:...|....|..:|..:..|...|...:.:..|           ||.|......:..||
Mouse   358 CHESARIEDMRKRHVETPQPPLLPAPAHHSFHLALSNQRRSPPEEPPDFCCPKCQYQAPDMDTLQ 422

  Fly   380 SHVNDCLD 387
            .||.:|::
Mouse   423 IHVMECIE 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
keyNP_001246503.1 Smc <120..>318 CDD:440809 68/290 (23%)
UBAN 230..313 CDD:197361 31/129 (24%)
IkbkgNP_001129539.1 NEMO 62..128 CDD:431942 12/68 (18%)
SMC_prok_B <105..>356 CDD:274008 64/266 (24%)
UBAN 269..355 CDD:197361 30/97 (31%)
zf_C2H2_10 404..429 CDD:436483 7/24 (29%)

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