DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3589 and degS

DIOPT Version :10

Sequence 1:NP_611968.1 Gene:CG3589 / 37966 FlyBaseID:FBgn0035065 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_417702.1 Gene:degS / 947865 ECOCYCID:EG11652 Length:355 Species:Escherichia coli


Alignment Length:229 Identity:54/229 - (23%)
Similarity:89/229 - (38%) Gaps:61/229 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   275 MSTTAFQLSRE-PSSF--AWERTIVVIESAGQQGTGTFIRVHN---------------KRFILTC 321
            :||..|..:.| |:|:  |..|....:.:...:|..|  ..||               :.:|:|.
E. coli    32 LSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNT--NSHNQLEIRTLGSGVIMDQRGYIITN 94

  Fly   322 AHVVGQNIETVNCRAADREFQSEVIWCNPDSDKPFDLALL---------TAPQDVPEQCCVRLAR 377
            .||:....:.:......|.|::.::    .||...|||:|         |.|.:         ||
E. coli    95 KHVINDADQIIVALQDGRVFEALLV----GSDSLTDLAVLKINATGGLPTIPIN---------AR 146

  Fly   378 SPATVGQMVYNAGFPY---------YVNFSFRHDFNPSIFQGRVIKCDTGAIMSDGSVQAGQSGG 433
            ....:|.:|...|.||         .::.:.|...||:   ||     ...:.:|.|:..|.|||
E. coli   147 RVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPT---GR-----QNFLQTDASINHGNSGG 203

  Fly   434 PMFDQNGCILGV-CVSNIKLDDVVYP-NINTAIP 465
            .:.:..|.::|: .:|..|.:|...| .|..|||
E. coli   204 ALVNSLGELMGINTLSFDKSNDGETPEGIGFAIP 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3589NP_611968.1 Trypsin_2 305..445 CDD:433149 37/172 (22%)
degSNP_417702.1 PRK10898 1..354 CDD:182820 54/229 (24%)

Return to query results.
Submit another query.