DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3589 and Psmd9

DIOPT Version :10

Sequence 1:NP_611968.1 Gene:CG3589 / 37966 FlyBaseID:FBgn0035065 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_080276.2 Gene:Psmd9 / 67151 MGIID:1914401 Length:222 Species:Mus musculus


Alignment Length:204 Identity:42/204 - (20%)
Similarity:69/204 - (33%) Gaps:63/204 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LKIRHALLEVTSPPAAKQSAIIINNELIISSGSILQPHLAVDGDKGAQNKAIVARLQRGQLLDVQ 67
            :|..:.:||       .|..|.:|..|:...|   .|...||        ....|..|..::.:|
Mouse    37 IKANYDVLE-------SQKGIGMNEPLVDCEG---YPRADVD--------LYQVRTARHNIICLQ 83

  Fly    68 NEEQEEDAQI-RSLHFVATFDPQQRRPRPIAAPGSRQPHILSRFTAHPLYVFCANEVCRNLHHIL 131
            |:.:....|: .:||.:...| ::::.|.:|.                     |.|...|..   
Mouse    84 NDHKALMKQVEEALHQLHARD-KEKQARDMAE---------------------AREEAMNRR--- 123

  Fly   132 LTADSGDAGEVLRSSFVVLGLRKPEKEKSFKRFLAHIANYLRYLQPMHTLDDVLVMCSPFGLENF 196
            |.::|    .||..:|..:....|...       |.||.    ||    :||.:|.......:||
Mouse   124 LASNS----PVLPQAFARVNSISPGSP-------ASIAG----LQ----VDDEIVEFGSVNTQNF 169

  Fly   197 YKTISIGKV 205
            ....::|.|
Mouse   170 QSVQNVGTV 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3589NP_611968.1 Trypsin_2 305..445 CDD:433149
Psmd9NP_080276.2 Nas2_N 23..102 CDD:465689 18/82 (22%)
RseP <129..>214 CDD:440513 16/65 (25%)
Blue background indicates that the domain is not in the aligned region.

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