DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3589 and Tysnd1

DIOPT Version :10

Sequence 1:NP_611968.1 Gene:CG3589 / 37966 FlyBaseID:FBgn0035065 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001102402.1 Gene:Tysnd1 / 365571 RGDID:1307354 Length:567 Species:Rattus norvegicus


Alignment Length:485 Identity:123/485 - (25%)
Similarity:189/485 - (38%) Gaps:127/485 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 DVQNEEQEEDAQIRSLHFVATFDPQQRRPRPIAAPGSRQPHILSRFTAHPLYVFCANEVCRNLHH 129
            |..:||:||| |:|:|.:.|..    |..|..||...|.|.:    |..||              
  Rat   170 DAVSEEEEED-QLRALGWFALL----RVQRGAAAEERRGPAV----TVAPL-------------- 211

  Fly   130 ILLTADSGDAGEVLRSSFVVLGLRKPEKEKSFKRFLAHIANYLRYLQPMHTLDDVLVMC-SPFGL 193
                      |.|.:.:                                     .|:.| ||||.
  Rat   212 ----------GAVAKGA-------------------------------------PLLACGSPFGA 229

  Fly   194 ---ENFYKTISIGKVSNVMGRSGCLFAISNALPLGCEGSAVFNNKL--RLVGIVICTSFQRHHEN 253
               :.|..|:|.|.:||..|  ..|...:..|| |.||..||..:.  .||.:|......:..|.
  Rat   230 FCPDIFLNTLSRGVLSNAAG--PLLLTDARCLP-GTEGGGVFAARPAGALVALVAAPLCWKAREW 291

  Fly   254 VNLTL---AANFGYLLRNFMEQLGMSTTAFQ------------LSREPSSFAWERTIVVIESAGQ 303
            |.|||   ||....:.|:.:.:|...:|:..            ||......:|....|::|....
  Rat   292 VGLTLLCAAAPLLQVARSALSRLHPDSTSLSALLPPEVGAPRGLSLRDLGSSWAAAAVLVECGAV 356

  Fly   304 QGTGTFIRVHNKRFILTCAHVVGQNIETVNCRAADREFQSEVIWCN----PDSDKPFDLALLTAP 364
            .|:|..:.   .|.::||.||..:  ||..........::..||..    .....|:|:|:::..
  Rat   357 WGSGVAVA---PRLVVTCRHVAPR--ETARVLVHSATPRNVAIWGRVVFATQETSPYDIAVVSLE 416

  Fly   365 QDVPEQCCVRLARSPATVGQMVYNAGFPY-YVNFS-FRHDFNPSIFQG---RVIKCDTGAIM--S 422
            ::        |...|..|....::.|.|. .|.|. |.....||:..|   .|:..|...:|  :
  Rat   417 EE--------LNGVPVPVPAEHFHEGEPVSVVGFGVFGQACGPSVTSGILSAVVHVDDAPVMLQT 473

  Fly   423 DGSVQAGQSGGPMFD-QNGCILGVCVSNIKLDD--VVYPNINTAIPICDIRNTLQQFARTNDLNV 484
            ..:|..|.||||:|. ::|.:||:..||.:.::  ..||::|.:|||..::..|:|:::|.||..
  Rat   474 TCAVHGGSSGGPLFSTRSGDLLGIVASNTRDNNTGATYPHLNFSIPITVLQPALKQYSQTGDLCG 538

  Fly   485 LSNLVASPD-VHRVWSLEMP----PIRSKL 509
            |..|..:.: |..||.|:.|    | ||||
  Rat   539 LRELDHTTEPVRVVWRLQRPLPEAP-RSKL 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3589NP_611968.1 Trypsin_2 305..445 CDD:433149 37/151 (25%)
Tysnd1NP_001102402.1 Trypsin_2 358..497 CDD:433149 37/151 (25%)

Return to query results.
Submit another query.