DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3589 and psmd-9

DIOPT Version :9

Sequence 1:NP_611968.1 Gene:CG3589 / 37966 FlyBaseID:FBgn0035065 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001379558.1 Gene:psmd-9 / 24104302 WormBaseID:WBGene00016623 Length:197 Species:Caenorhabditis elegans


Alignment Length:100 Identity:19/100 - (19%)
Similarity:36/100 - (36%) Gaps:35/100 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LAVDGDKGAQNKAIVARLQRGQLLDVQNEEQEEDAQI-----RSLH------FVATFDPQQRRPR 94
            :.:..|:.|..:.||        ::::||.:|...|.     :.:|      ||......:..|.
 Worm    63 ICLRNDRAALTEKIV--------VEMENENKEVSGQTATSEEKPVHRTSNEPFVKISSVVELSPA 119

  Fly    95 PIAAPGSRQPHILSRFTAHPLYVFCANEVCRNLHH 129
            .|.  |.|:..::.::              .||||
 Worm   120 DIG--GFRKDDLIIQY--------------GNLHH 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3589NP_611968.1 Trypsin 296..471 CDD:278516
Trypsin_2 305..445 CDD:290102
psmd-9NP_001379558.1 Nas2_N 7..81 CDD:408080 4/25 (16%)
PDZ_6 110..165 CDD:407688 7/44 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0265
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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