DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRS-m and yars2

DIOPT Version :9

Sequence 1:NP_611967.1 Gene:TyrRS-m / 37965 FlyBaseID:FBgn0035064 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_001137392.1 Gene:yars2 / 556702 ZFINID:ZDB-GENE-030131-6268 Length:474 Species:Danio rerio


Alignment Length:453 Identity:223/453 - (49%)
Similarity:306/453 - (67%) Gaps:11/453 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VLRHSHRQMSQKNLLELTDRGFFHGIFPDTAA-PRMKQLFTRGQQSIYAGFDPTADSLHVGNLLV 78
            :|.||....:...|..|.:||.....||:.|| ..:..|...|.||||.||||||||||.||||.
Zfish    26 LLFHSSASKTSSLLSSLHNRGLLKDSFPEVAAQAEIPDLLRSGPQSIYCGFDPTADSLHAGNLLA 90

  Fly    79 IMGLIHCQRAGHRPIALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRRVFENHENCL 143
            |:||:|.:.|||..|||:||||..|||||||:|||.:|....::.|.:.|.:.|.|:|.:||  |
Zfish    91 IIGLLHFRSAGHHIIALLGGATAQIGDPSGRQTERERLSPAAVQENARGILESLHRIFTHHE--L 153

  Fly   144 W---DSKKQKLPLAPLIIVNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRLESEDGMSFT 205
            :   ||.:    |..|.::||..||.|..|::|.:.:||.||||:||||.|||:||:|.:|||||
Zfish   154 YFCPDSSR----LGRLTVLNNRSWYKDYDLLEFFSEVGRSFRMGTMLSRHSVQTRLKSAEGMSFT 214

  Fly   206 EFTYQIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLTLPLVTTEEGDK 270
            ||:||:|||:|:..|.:.|.|..|:||:||.||:|:|||.|.| :...||:|||:|||||..|||
Zfish   215 EFSYQLFQAFDFYQLHQLHGCRIQLGGTDQLGNIMSGHEFIHR-KTGEEVYGLTVPLVTTSMGDK 278

  Fly   271 FGKSAGNAVWLDGNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQVEQLMREHTKEPEKRKAQ 335
            .||:|||||||:.:|||||..||:|||:||:.||:.||||||:.|.:||.||.:..|:|.||.|.
Zfish   279 LGKTAGNAVWLNRDKTSPFEFYQYFLRLPDNSVERYLKLFTFLSLSEVENLMEQQRKDPGKRIAH 343

  Fly   336 TLLAEDVTLLVHGESGLKQAERVTNALYKGNVEGLAELNLSEIQQTFQGATMVNLLTEPGMSILE 400
            ..||.:||.||||:.||:.|:|.|.|||..::|.|.:::.:|:|:.|:.|.......|||.::|:
Zfish   344 KRLAAEVTKLVHGKDGLESAKRCTTALYHSSIEALEQMSDTELQEIFREAPFHEFFLEPGTTVLD 408

  Fly   401 LAMKAKCFPTETDAVRIINAGGFYVNQKRVQNIAEVLTTGVHILRNGISLLRVGKRNFYIVRW 463
            ...:|:..|......::|..||.::|.:|.:|..:||..|..||.||:||:||||:||:|::|
Zfish   409 ACRRARAIPDGPRGYQMIKDGGVWINHQRAENPEQVLIVGQQILSNGLSLIRVGKKNFHILKW 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRS-mNP_611967.1 PRK05912 23..463 CDD:235645 219/443 (49%)
TyrRS_core 58..345 CDD:173902 163/289 (56%)
yars2NP_001137392.1 PRK05912 43..471 CDD:235645 217/434 (50%)
TyrRS_core 70..353 CDD:173902 163/289 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596900
Domainoid 1 1.000 348 1.000 Domainoid score I1000
eggNOG 1 0.900 - - E1_COG0162
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7097
Inparanoid 1 1.050 438 1.000 Inparanoid score I1643
OMA 1 1.010 - - QHG62672
OrthoDB 1 1.010 - - D419291at33208
OrthoFinder 1 1.000 - - FOG0004408
OrthoInspector 1 1.000 - - oto39053
orthoMCL 1 0.900 - - OOG6_101423
Panther 1 1.100 - - LDO PTHR11766
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1462
SonicParanoid 1 1.000 - - X3126
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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