DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRS-m and TyrRS

DIOPT Version :9

Sequence 1:NP_611967.1 Gene:TyrRS-m / 37965 FlyBaseID:FBgn0035064 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_648895.1 Gene:TyrRS / 39829 FlyBaseID:FBgn0027080 Length:525 Species:Drosophila melanogaster


Alignment Length:127 Identity:30/127 - (23%)
Similarity:56/127 - (44%) Gaps:26/127 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 WLDGNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQVE-------QLMREHTKEPEKRKAQTL 337
            :|| |..:|::|.:...:..:..::.:|.... :||.:::       ||.:|:|.:..|      
  Fly    78 YLD-NMKAPWSLLELRTKYYEQVIKAMLSSIG-VPLEKLKFVKGSDYQLSKEYTLDVYK------ 134

  Fly   338 LAEDVTLLVH-----GESGLKQAE--RVTNALYKGNVEGLAELNLSEIQQTFQGATMVNLLT 392
            |:..||  .|     |...:||.|  .::..||.| ::.|.|..| ::...|.|.....:.|
  Fly   135 LSSVVT--QHDAKKAGAEVVKQVEYPLLSGLLYPG-LQALDEEYL-KVDAQFGGVDQRKIFT 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRS-mNP_611967.1 PRK05912 23..463 CDD:235645 30/127 (24%)
TyrRS_core 58..345 CDD:173902 16/71 (23%)
TyrRSNP_648895.1 nt_trans 8..334 CDD:294020 30/127 (24%)
tyrS 12..332 CDD:272976 30/127 (24%)
tRNA_bind_EMAP-II_like 364..466 CDD:239198
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0162
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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