DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRS-m and Yars2

DIOPT Version :10

Sequence 1:NP_611967.1 Gene:TyrRS-m / 37965 FlyBaseID:FBgn0035064 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_001009627.1 Gene:Yars2 / 287924 RGDID:1311696 Length:471 Species:Rattus norvegicus


Alignment Length:435 Identity:210/435 - (48%)
Similarity:291/435 - (66%) Gaps:10/435 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RGFFHGIFPDTAA-PRMKQLFTR----GQQSIYAGFDPTADSLHVGNLLVIMGLIHCQRAGHRPI 93
            ||.|...||::.. ..:.:||.|    ..|::|.|||||.||||||:||.::||.|.|||||..|
  Rat    39 RGLFKEFFPESGTKTELPELFDRRRAGSPQTVYCGFDPTGDSLHVGHLLTLLGLFHFQRAGHNVI 103

  Fly    94 ALVGGATGLIGDPSGRKTERNQLGETVIETNLKAIEQQLRRVFENHENCLWDSKKQKLPLAPLII 158
            |||||:|.|:||||||..||..|....:..|.:|:::.|..:..||.....|.:    |.....:
  Rat   104 ALVGGSTALLGDPSGRTKEREALSAECVRANARALQRGLETLAANHARLFADGR----PWGTFTV 164

  Fly   159 VNNADWYADLQLIDFVANMGRHFRMGSMLSRSSVQSRLESEDGMSFTEFTYQIFQAYDWLHLLRR 223
            ::||.|:....|:||:|.:|.|||||::|||.||||||:|.:|||..||.||:.||||:.:|.|.
  Rat   165 LDNAAWFQKQHLMDFLATVGGHFRMGTLLSRLSVQSRLKSPEGMSLAEFFYQVLQAYDFYYLFRH 229

  Fly   224 HNCCFQMGGSDQTGNLMTGHELISRVERKREVFGLTLPLVTTEEGDKFGKSAGNAVWLDGNKTSP 288
            :.|..|:|||||.||:|:|:|.|.::..: :|||:|:||:|:..|.|.||||||||||:..||||
  Rat   230 YGCRVQLGGSDQLGNIMSGYEFIHKLTGE-DVFGITVPLITSTTGAKLGKSAGNAVWLNREKTSP 293

  Fly   289 FALYQFFLRMPDSEVEKLLKLFTFIPLPQVEQLMREHTKEPEKRKAQTLLAEDVTLLVHGESGLK 353
            |.|||||:|..|..||:.||||||:|||:::.:|:.|.||||||.||..||.:||.||||:.||.
  Rat   294 FELYQFFIRQQDDSVERYLKLFTFLPLPEIDHIMQLHVKEPEKRIAQKRLAAEVTKLVHGQEGLD 358

  Fly   354 QAERVTNALYKGNVEGLAELNLSEIQQTFQGATMVNLLTEPGMSILELAMKAKCFPTETDAVRII 418
            .|:|.|.|||..::|.|..::..|:::.|:.|:...|:.:||.|:::...||...|......|:|
  Rat   359 SAKRCTQALYHSSIEALEVMSDQELKELFKEASFSELVLDPGTSVIDTCRKANAIPDGPRGYRMI 423

  Fly   419 NAGGFYVNQKRVQNIAEVLTTGVHILRNGISLLRVGKRNFYIVRW 463
            ..||..:|.::|.|...||..|.|||:||:|||::|||||||::|
  Rat   424 TEGGVSINHRQVTNPESVLVIGQHILKNGLSLLKIGKRNFYIIKW 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRS-mNP_611967.1 TyrS 28..464 CDD:439932 210/435 (48%)
Yars2NP_001009627.1 TyrS 51..468 CDD:439932 204/421 (48%)
'HIGH' region 76..85 7/8 (88%)
'KMSKS' region 275..279 2/3 (67%)

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