DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRS-m and SPCC576.06c

DIOPT Version :9

Sequence 1:NP_611967.1 Gene:TyrRS-m / 37965 FlyBaseID:FBgn0035064 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_588433.1 Gene:SPCC576.06c / 2539529 PomBaseID:SPCC576.06c Length:445 Species:Schizosaccharomyces pombe


Alignment Length:427 Identity:149/427 - (34%)
Similarity:226/427 - (52%) Gaps:40/427 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 SIYAGFDPTADSLHVGNLLVIMGLIHCQRAGHRPIALVGGATGLIGDPSGRKTERNQLGETVIET 123
            |:|.|.||||.|||||||:.:|.|:|....|.....::|.||..:||||||.|.|.|:.||....
pombe    31 SVYLGADPTAASLHVGNLVALMPLVHFFLNGFPVFTVIGDATAQLGDPSGRSTSRKQMAETTRTA 95

  Fly   124 NLKAIEQQLR----RVFENHENCLWDSKKQKLPLAPL------IIVNNADWYADLQLIDFVANMG 178
            |..:|..||:    .:....::|       ..|.:.:      .||.|:.||.:|:|:.|::::|
pombe    96 NSNSIHNQLKDLSSSILSYAQDC-------NYPFSQMPSSSQWSIVRNSSWYENLKLLKFLSSVG 153

  Fly   179 RHFRMGSMLSRSSVQSRLESEDGMSFTEFTYQIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGH 243
            .|.|:..||:|.||.:||:|..|:||.|.|||:.||||:.:|...|:...|:|||||.||:..|.
pombe   154 PHVRVSQMLARDSVTTRLQSPSGLSFAELTYQLLQAYDYSYLYENHSVNLQIGGSDQWGNITAGT 218

  Fly   244 ELISRVERKREVFGLTLPLVTTEEGDKFGKSAGNAVWLDGNKTSPFALYQFFLRMPDSEVEKLLK 308
            :|:.|......|:.||.||:|:..|.|.|||||||:|||...|..::|||:|:..||....|.|.
pombe   219 DLVRRTHPNANVYALTTPLLTSSSGQKLGKSAGNAIWLDPKLTDSYSLYQYFISAPDDLACKCLD 283

  Fly   309 LFTFIPLPQVEQLMREHTKEPEKRKAQTLLAEDVTLLVHGESGLKQAERVTNALY---------- 363
            :.|.:||.|:||:..||.|:|.:|.....||.:|..:|||:..|:.|:..|..|:          
pombe   284 MLTLLPLEQLEQIKAEHEKDPSQRIVHKYLASNVVRMVHGKKALELAQIQTKLLHGAHQAPFGFY 348

  Fly   364 -KGNVEGLAELNLSEIQQTFQGA----TMVNLLTEPGMSILELAMKAKCFPTETDAVRIINAGGF 423
             :...:|.:..:|.||:..|:..    |:.:.:.:...|  .|....:.:.:..:|...|.:|..
pombe   349 SEAPQQGDSFPSLPEIRALFKDCKFYRTIDSSIKDQPFS--RLLRTLQIYTSRKEATEHILSGAV 411

  Fly   424 YVNQKRVQNIAEVLTTGVHILRNGISLLRVGKRNFYI 460
            .:..|      .:|.:......|.:.:||.|||.|.:
pombe   412 SLGHK------PILDSNYKFPDNSLFVLRAGKRTFVL 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRS-mNP_611967.1 PRK05912 23..463 CDD:235645 149/427 (35%)
TyrRS_core 58..345 CDD:173902 122/295 (41%)
SPCC576.06cNP_588433.1 TyrS 7..445 CDD:223240 149/427 (35%)
TyrRS_core 31..320 CDD:173902 122/295 (41%)
S4 389..443 CDD:214638 13/60 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 252 1.000 Domainoid score I398
eggNOG 1 0.900 - - E1_COG0162
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7097
Inparanoid 1 1.050 257 1.000 Inparanoid score I760
OMA 1 1.010 - - QHG62672
OrthoFinder 1 1.000 - - FOG0004408
OrthoInspector 1 1.000 - - oto102118
orthoMCL 1 0.900 - - OOG6_101423
Panther 1 1.100 - - LDO PTHR11766
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1462
SonicParanoid 1 1.000 - - X3126
TreeFam 1 0.960 - -
1312.950

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