DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRS-m and yars-2

DIOPT Version :9

Sequence 1:NP_611967.1 Gene:TyrRS-m / 37965 FlyBaseID:FBgn0035064 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_741382.1 Gene:yars-2 / 177237 WormBaseID:WBGene00006968 Length:447 Species:Caenorhabditis elegans


Alignment Length:419 Identity:160/419 - (38%)
Similarity:237/419 - (56%) Gaps:46/419 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 IYAGFDPTADSLHVGNLLVIMGLIHCQRAGHRPIALVGGATGLIGDPSGRKTERNQLGETVIETN 124
            :||||||||:|||:||||:::.||..|:.|.|||||:|..|..||||||:|:||..|...||..|
 Worm    59 VYAGFDPTAESLHIGNLLILVNLIRAQQFGIRPIALIGEFTASIGDPSGKKSERGLLAGDVIMHN 123

  Fly   125 LKAIEQQLRRVFENHENCLWDSKKQKLPLAPLIIVNNADWYADLQLIDFVANMGRHFRMGSMLSR 189
            .:.:..|:.::|||...   .|:|.       |||||.||...:.|.||:... ::.::|.||..
 Worm   124 SRKVTDQICKIFENAPG---SSEKP-------IIVNNNDWLGKISLRDFLREC-KNMQVGKMLRM 177

  Fly   190 SSVQSRLESEDGMSFTEFTYQIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKRE 254
            :::::|||.  |:|:|||:||..||:||..|..::.|.||:||.||.|:|..|...|.::..:..
 Worm   178 NTIKNRLEV--GLSYTEFSYQTMQAFDWYTLSEKYGCRFQLGGYDQLGHLDFGAHYIKKMMNQAF 240

  Fly   255 VFGLTLPLVTTEEGDKFGKS-AGNAVWLDGNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQV 318
            ..|:..|::|...|.|.||| .|.|:|||..|||||..||||.::.|.:.|:||.||:...:..:
 Worm   241 AAGVCFPILTDSTGAKLGKSEGGGALWLDATKTSPFHFYQFFAQLHDDKAEELLLLFSLQDIEHI 305

  Fly   319 EQLMREHTKEPEKRKAQTLLAEDVTLLVHGESGLKQAERVTNALYKGNVEGLAELNLSEIQQTFQ 383
            ..:::.|.....:..||..||.::|.:|||:.||:.|.|.|.|::......|:.|:.||:.|.|:
 Worm   306 RDVLKNHRSNLGQWIAQRELAAEITRIVHGKEGLEVAMRCTKAMFGAKKADLSGLSRSEVLQLFR 370

  Fly   384 GATMVNLLTEPGMSILELAMKAKCFPTETDAVR--------IINAGGFYVN--QKR--VQNIAEV 436
              |.::|..|...::.:||          ||.|        ::..|.|.||  :||  .::||:|
 Worm   371 --TTIDLKKENVATMGQLA----------DASRLGSGKGHLLMQQGAFSVNGEKKRSPSESIADV 423

  Fly   437 LTTGVHILRNGISLLRV--GKRNFYIVRW 463
                  .|.|...|..|  |||.:.:|||
 Worm   424 ------FLENASDLTLVCWGKRGYQLVRW 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRS-mNP_611967.1 PRK05912 23..463 CDD:235645 158/417 (38%)
TyrRS_core 58..345 CDD:173902 118/285 (41%)
yars-2NP_741382.1 PRK05912 50..446 CDD:235645 158/417 (38%)
TyrRS_core 57..332 CDD:173902 118/285 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167937
Domainoid 1 1.000 237 1.000 Domainoid score I1303
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7097
Inparanoid 1 1.050 257 1.000 Inparanoid score I1940
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62672
OrthoDB 1 1.010 - - D419291at33208
OrthoFinder 1 1.000 - - FOG0004408
OrthoInspector 1 1.000 - - oto17683
orthoMCL 1 0.900 - - OOG6_101423
Panther 1 1.100 - - LDO PTHR11766
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1462
SonicParanoid 1 1.000 - - X3126
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.940

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