DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRS-m and yars2

DIOPT Version :9

Sequence 1:NP_611967.1 Gene:TyrRS-m / 37965 FlyBaseID:FBgn0035064 Length:464 Species:Drosophila melanogaster
Sequence 2:XP_002942334.3 Gene:yars2 / 100494249 XenbaseID:XB-GENE-959498 Length:464 Species:Xenopus tropicalis


Alignment Length:467 Identity:230/467 - (49%)
Similarity:307/467 - (65%) Gaps:15/467 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLPLR--RSLLKPLQDVLRHSHRQMSQKNLLE-LTDRGFFHGIFPDTAAP-RMKQLFTRGQQSIY 61
            ||.||  ..|.:|:...|.||      ...|| ...||.|..:||..:.| |:.:|...|.|:.|
 Frog     6 MLALRGVPCLCRPVSRRLSHS------AAFLEAAARRGLFKDVFPAESGPTRLYELLGSGPQTAY 64

  Fly    62 AGFDPTADSLHVGNLLVIMGLIHCQRAGHRPIALVGGATGLIGDPSGRKTERNQLGETVIETNLK 126
            .|||||||||||||||.::||||..||||..||::|||||.:||||||..||..|....:..|::
 Frog    65 CGFDPTADSLHVGNLLAVLGLIHFHRAGHNVIAVIGGATGRLGDPSGRGREREALRPEALAGNIR 129

  Fly   127 AIEQQLRRVFENHENCLWDSKKQKLPLAPLIIVNNADWYADLQLIDFVANMGRHFRMGSMLSRSS 191
            .|...|.|:|.|.|..:...:    |...:.|::|..||......||:|::|||||||.||||.|
 Frog   130 GIRGCLERLFGNCEALVPGGR----PGGTVTILDNEQWYRHRGAADFLASVGRHFRMGPMLSRHS 190

  Fly   192 VQSRLESEDGMSFTEFTYQIFQAYDWLHLLRRHNCCFQMGGSDQTGNLMTGHELISRVERKREVF 256
            .||||.|.:|||.:||.|.:|||||:.:|.|..||..|:||:||.||:|:||:.|.||..: |||
 Frog   191 AQSRLGSPEGMSLSEFLYPLFQAYDFYYLHRNRNCTIQLGGTDQLGNIMSGHDFIQRVTGE-EVF 254

  Fly   257 GLTLPLVTTEEGDKFGKSAGNAVWLDGNKTSPFALYQFFLRMPDSEVEKLLKLFTFIPLPQVEQL 321
            |:|:||||...|||.|||||||:||:.::||||.|||||:|.|||.|.:.||||||||||::|::
 Frog   255 GVTVPLVTNTAGDKLGKSAGNAIWLNRDRTSPFELYQFFVRQPDSAVGRFLKLFTFIPLPEIERI 319

  Fly   322 MREHTKEPEKRKAQTLLAEDVTLLVHGESGLKQAERVTNALYKGNVEGLAELNLSEIQQTFQGAT 386
            |.:|..|||:|..|..||.:||.:|||..||:.|:|.|.|||:.:||.|.:::..|:|:.|:.|.
 Frog   320 MEQHQAEPERRLPQKRLAAEVTKIVHGNGGLESAKRCTQALYQSSVEALDKMSDRELQELFREAP 384

  Fly   387 MVNLLTEPGMSILELAMKAKCFPTETDAVRIINAGGFYVNQKRVQNIAEVLTTGVHILRNGISLL 451
            ...:|.|||..:::|.:|....|.......:|::||..:|.::|.|..|||..|.|||:||:|||
 Frog   385 FTEVLLEPGTRVMDLCLKVSAVPEGARGYEMISSGGLSINHRKVTNPDEVLVPGQHILQNGLSLL 449

  Fly   452 RVGKRNFYIVRW 463
            ||||:|||:|:|
 Frog   450 RVGKKNFYVVKW 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRS-mNP_611967.1 PRK05912 23..463 CDD:235645 220/441 (50%)
TyrRS_core 58..345 CDD:173902 158/286 (55%)
yars2XP_002942334.3 PRK05912 29..461 CDD:235645 220/436 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 340 1.000 Domainoid score I1095
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7097
Inparanoid 1 1.050 441 1.000 Inparanoid score I1620
OMA 1 1.010 - - QHG62672
OrthoDB 1 1.010 - - D419291at33208
OrthoFinder 1 1.000 - - FOG0004408
OrthoInspector 1 1.000 - - oto105496
Panther 1 1.100 - - LDO PTHR11766
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1462
SonicParanoid 1 1.000 - - X3126
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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