DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and HNRNPDL

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_112740.1 Gene:HNRNPDL / 9987 HGNCID:5037 Length:420 Species:Homo sapiens


Alignment Length:202 Identity:44/202 - (21%)
Similarity:83/202 - (41%) Gaps:45/202 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 PSDPEDSKSEDEAKSDDEAAAEGSAASGAEEEESAENGQITSDQLSSLLRGASKTNRHVLYVTNL 121
            |:|...:..:....|:.|..||||..:.::.::  ::|:                    :::..|
Human   113 PADSSVTMEDMNEYSNIEEFAEGSKINASKNQQ--DDGK--------------------MFIGGL 155

  Fly   122 NFETTKDDLELHFSAAG-----TVKSIRIPKKRRGGFAFVEMADLSSFQNAFQLHNTELQGRNIK 181
            :::|:|.||..:.|..|     |:|:..:..:.| ||.||...|.:|.....:|...:|.|:.|.
Human   156 SWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSR-GFGFVLFKDAASVDKVLELKEHKLDGKLID 219

  Fly   182 VQISEAGKKKSANKK------------NIIKQKNRKLAEMRN-----EQKTFTKSGKFYDKDLKK 229
            .:.::|.|.|...||            ..||:......|:.|     :.||..:.|..:.....:
Human   220 PKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDE 284

  Fly   230 EKAKEML 236
            |..|::|
Human   285 EPVKKLL 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 34/156 (22%)
RRM 116..187 CDD:440488 20/75 (27%)
HNRNPDLNP_112740.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..83
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..120 2/6 (33%)
RRM1_hnRPDL 149..224 CDD:410152 20/95 (21%)
RRM2_hnRPDL 234..308 CDD:409998 11/58 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..348
Necessary for interaction with TNPO1. /evidence=ECO:0000269|PubMed:9524220 342..420
Necessary for its nuclear import and export 396..420
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 398..420
Blue background indicates that the domain is not in the aligned region.

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