DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and NSR1

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_011675.1 Gene:NSR1 / 853064 SGDID:S000003391 Length:414 Species:Saccharomyces cerevisiae


Alignment Length:209 Identity:48/209 - (22%)
Similarity:82/209 - (39%) Gaps:33/209 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ASDSGSDYEVEAFFNPKRVQRTVNDDSADLLGNFDDQKRREIFEGTYVDKEDGRNPSDPEDSKSE 66
            :|.|.||.|.||    :..:....|.|:....:..|::..|..|.|..::....:.||...|.|.
Yeast    67 SSSSSSDSESEA----ETKKEESKDSSSSSSDSSSDEEEEEEKEETKKEESKESSSSDSSSSSSS 127

  Fly    67 DEAKSDDEAAAEGSAASGAEEEESAENGQITSDQLSSLLRGASKTNRH-------VLYVTNLNFE 124
            |.....:|:..:...:..|||||..|:              ::|..::       .::|..|::.
Yeast   128 DSESEKEESNDKKRKSEDAEEEEDEES--------------SNKKQKNEETEEPATIFVGRLSWS 178

  Fly   125 TTKDDLELHFSAAGTVKSIRI----PKKRRGGFAFVEMADLSSFQNAFQ-LHNTELQGRNIKVQI 184
            ...:.|:..|...|.|...|:    ...|..|:.:|:..:.|..:.|.| :...|:.||.|...:
Yeast   179 IDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDM 243

  Fly   185 S---EAGKKKSANK 195
            |   .||....|.|
Yeast   244 STSKPAGNNDRAKK 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 39/175 (22%)
RRM 116..187 CDD:440488 18/78 (23%)
NSR1NP_011675.1 RRM1_gar2 169..244 CDD:409881 17/74 (23%)
RRM2_gar2 269..341 CDD:409882
Blue background indicates that the domain is not in the aligned region.

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