DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and GBP2

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_009916.1 Gene:GBP2 / 850346 SGDID:S000000517 Length:427 Species:Saccharomyces cerevisiae


Alignment Length:163 Identity:41/163 - (25%)
Similarity:59/163 - (36%) Gaps:40/163 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 GNFDDQKRREIFEGTYVDKEDGRNPSDPEDSKSEDEAKSDDEAAA---EGSAASGAEEEESAENG 94
            |.|:.:|..:.:.....|.||.|.   .|...::|.|...||.||   ||....|          
Yeast   294 GRFNKRKNNDRYNQRREDLEDTRG---TEPGLAQDAAVHIDETAAKFTEGVNPGG---------- 345

  Fly    95 QITSDQLSSLLRGASKTNRH-VLYVTNLNFETTKDDLELHFSAAGTVKSIRIPKKRRG---GFAF 155
                             :|: .:|.:||.|.|.:.||...|...|.:.:..:..:..|   |.|.
Yeast   346 -----------------DRNCFIYCSNLPFSTARSDLFDLFGPIGKINNAELKPQENGQPTGVAV 393

  Fly   156 VEMADLSSFQNAFQ-LHNTELQGRNIKVQISEA 187
            ||..:|.......| |:|....|  ..:|||.|
Yeast   394 VEYENLVDADFCIQKLNNYNYGG--CSLQISYA 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 39/160 (24%)
RRM 116..187 CDD:440488 22/74 (30%)
GBP2NP_009916.1 RRM1_HRB1_GBP2 121..197 CDD:410184
RRM2_HRB1_GBP2 218..292 CDD:410185
RRM3_HRB1_GBP2 347..425 CDD:410186 24/80 (30%)
Blue background indicates that the domain is not in the aligned region.

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