DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and SR45a

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_563787.2 Gene:SR45a / 837246 AraportID:AT1G07350 Length:382 Species:Arabidopsis thaliana


Alignment Length:161 Identity:36/161 - (22%)
Similarity:68/161 - (42%) Gaps:32/161 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 LYVTNLNFETTKDDLELHFSAAGTVKSIRI---PKKRRG-GFAFVEMADLSSFQNAFQ-LHNTEL 175
            ||||.|:...|:.|||.||:..|.|..:.:   |..|.. ||.|:.|..:.......: |.::.|
plant    77 LYVTGLSHRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSLDHSVL 141

  Fly   176 QGRNIKVQISE------------------AGKKKSAN---KKNIIKQKNRKLAEMRNEQKTFTKS 219
            |||.|.|:.:.                  .|:.||.:   ::::...::|..:...:..::::.|
plant   142 QGRVITVEKARRRRGRTPTPGKYLGLRTARGRHKSPSYSPRRSVSCSRSRSRSYSSDRGRSYSPS 206

  Fly   220 GKFYDKDLKKEKAKEMLARKRW---RKKPAP 247
               |.:..:.........|:|:   .:.|:|
plant   207 ---YGRRGRSSSYSPFYRRRRFYSPSRSPSP 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 29/106 (27%)
RRM 116..187 CDD:440488 26/93 (28%)
SR45aNP_563787.2 RRM 74..151 CDD:440488 26/73 (36%)

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