DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and SC35

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_201225.1 Gene:SC35 / 836541 AraportID:AT5G64200 Length:303 Species:Arabidopsis thaliana


Alignment Length:37 Identity:9/37 - (24%)
Similarity:18/37 - (48%) Gaps:7/37 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 CRLGEVGST--LYTKANLILCKRDYLRLFGTTGYCAA 119
            |..|:.|..  |...:.||:|:::     |...:|::
plant   331 CHPGDPGEAEWLLGGSYLIICRKE-----GLQTHCSS 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 9/37 (24%)
RRM 116..187 CDD:440488 1/4 (25%)
SC35NP_201225.1 RRM_SRSF2_SRSF8 18..90 CDD:409751
PHA03307 <204..>303 CDD:223039
Blue background indicates that the domain is not in the aligned region.

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