DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and AT5G59860

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_200794.1 Gene:AT5G59860 / 836108 AraportID:AT5G59860 Length:157 Species:Arabidopsis thaliana


Alignment Length:125 Identity:30/125 - (24%)
Similarity:56/125 - (44%) Gaps:13/125 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 SGAEEEESAENGQITSDQLSSLLRGASKTNRHVL------YVTN--LNFETTKDDLELHFSA-AG 138
            |||::||:..|.: |..::....|.:....|.::      .|:|  |:..||...|...|:. |.
plant    33 SGAKDEEAKFNKR-TKYKMRIRPRSSISKRRRLIGGKTLTCVSNSGLSAYTTDQSLRQLFAPFAR 96

  Fly   139 TVKSIRIPKKRRGGFAFVEMADLSSFQNAFQLHNTEL-QGRNIKVQISEAGKKKSANKKN 197
            .:|..:  .:|..||.|:........|.|.:..|.:: .||.|.|:.::..:..:.:.|:
plant    97 LIKDQQ--TQRPKGFGFITFESEDDAQKALKALNGKIVNGRLIFVETAKEVEAPTTSLKS 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 29/123 (24%)
RRM 116..187 CDD:440488 20/80 (25%)
AT5G59860NP_200794.1 RRM 73..144 CDD:440488 20/72 (28%)

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