DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and AT5G10350

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_196597.1 Gene:AT5G10350 / 830899 AraportID:AT5G10350 Length:217 Species:Arabidopsis thaliana


Alignment Length:164 Identity:44/164 - (26%)
Similarity:78/164 - (47%) Gaps:23/164 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 DQKRREIFEGTYVDKEDGRNPSDPEDSKSEDE-------------AKSDDEAAAEGSAASGAEEE 88
            :::..|::.|...:..|...|....|..:.||             .:.::||||.....:..|:|
plant     2 EEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQAKVEKE 66

  Fly    89 ESAENGQITSD--QLSSLLRGASKTNRHVLYVTNLNFETTKDDLELHFSAAGTVKSIRIPKKRRG 151
            ..|     |.|  .:::...|..:.:...:||.|:::..|.::::|||...|||..:.|...:.|
plant    67 MGA-----TQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTILMDKFG 126

  Fly   152 ---GFAFVEMADLSSFQNAFQLHNTELQGRNIKV 182
               |||:||..::.:.|.|.||:.:||.||.:||
plant   127 QPKGFAYVEFVEVEAVQEALQLNESELHGRQLKV 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 44/164 (27%)
RRM 116..187 CDD:440488 27/70 (39%)
AT5G10350NP_196597.1 PIN_SF <6..70 CDD:475124 14/68 (21%)
RRM_II_PABPs 90..161 CDD:409747 27/71 (38%)

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