DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and AT5G06210

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_196239.1 Gene:AT5G06210 / 830508 AraportID:AT5G06210 Length:146 Species:Arabidopsis thaliana


Alignment Length:88 Identity:30/88 - (34%)
Similarity:40/88 - (45%) Gaps:11/88 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 RG-ASKTNRHVLYVTNLNFETTKDDLELHFSAAGTVKSIRI----PKKRRGGFAFVEMADLSSFQ 165
            || |||     |::..|:|.||:..|...||..|.|...:|    ...|..||.||..|.....|
plant    30 RGVASK-----LFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQ 89

  Fly   166 NA-FQLHNTELQGRNIKVQISEA 187
            .| .:.:..:|.||.|.|..::|
plant    90 KALMEFNGQQLNGRTIFVDYAKA 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 30/88 (34%)
RRM 116..187 CDD:440488 24/75 (32%)
AT5G06210NP_196239.1 RRM_SF 34..113 CDD:473069 27/84 (32%)

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