DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and AT4G26650

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_567753.1 Gene:AT4G26650 / 828772 AraportID:AT4G26650 Length:455 Species:Arabidopsis thaliana


Alignment Length:17 Identity:6/17 - (35%)
Similarity:11/17 - (64%) Gaps:0/17 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 LCEYDYEERLVFASMAC 182
            :|:.|..:..:.:||||
plant    84 ICQQDLGDCWILSSMAC 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 6/17 (35%)
RRM 116..187 CDD:440488 6/17 (35%)
AT4G26650NP_567753.1 RRM1_hnRNPA_hnRNPD_like 17..87 CDD:409763 1/2 (50%)
RRM2_Hrp1p 123..200 CDD:409767
ser_rich_anae_1 <204..>385 CDD:468206
Blue background indicates that the domain is not in the aligned region.

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