DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and AT2G27330

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_565646.2 Gene:AT2G27330 / 817276 AraportID:AT2G27330 Length:116 Species:Arabidopsis thaliana


Alignment Length:97 Identity:24/97 - (24%)
Similarity:43/97 - (44%) Gaps:13/97 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 SKTNRHVLYVTNLNFETTKDDLELHFSAAGTVKSIRI--------PKKRRGGFAFVEMADLSSFQ 165
            |::....|:|..::|.:|::.|...||..|.|..:.:        ||    |||:|..:.....:
plant    16 SRSFSSTLFVKGISFSSTEETLTQAFSQYGQVLKVDVIMDKIRCRPK----GFAYVTFSSKEEAE 76

  Fly   166 NAFQLHNTEL-QGRNIKVQISEAGKKKSANKK 196
            .|....|.:| .||.:.:..::|.|....:.|
plant    77 KALLELNAQLVDGRVVILDTTKAAKHNPPDTK 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 24/97 (25%)
RRM 116..187 CDD:440488 20/79 (25%)
AT2G27330NP_565646.2 RRM_SF 23..99 CDD:473069 20/79 (25%)

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