DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and Rbm19

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_083038.1 Gene:Rbm19 / 74111 MGIID:1921361 Length:952 Species:Mus musculus


Alignment Length:181 Identity:55/181 - (30%)
Similarity:80/181 - (44%) Gaps:25/181 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 GTYVDKEDGRNPSDPEDSKSEDEAKSDDE---AAAEGSAAS-GAEEEESAENGQITSDQLSSLLR 106
            |....|:|.::....|.::.|.|...|.|   |:.||:.|| |..|||..|..:...:.:...  
Mouse   660 GAAPQKKDSQHEQPAEKAEVEQETVLDPEGEKASVEGAEASTGKMEEEEEEEEEEEEESIPGC-- 722

  Fly   107 GASKTNRHVLYVTNLNFETTKDDLELHFSAAGTVKSIRIPKKRRG-------GFAFVEMADLSSF 164
                    .|::.||||.||::.|:..||..|.:||..|.||:..       ||.|||.......
Mouse   723 --------TLFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQA 779

  Fly   165 QNAF-QLHNTELQGRNIKVQISEAGKK---KSANKKNIIKQKNRKLAEMRN 211
            |.|. ||....:.|..::|:|||...|   .|..||.:.|::......:||
Mouse   780 QKALKQLQGHTVDGHKLEVRISERATKPALTSTRKKQVPKKQTTSKILVRN 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 51/165 (31%)
RRM 116..187 CDD:440488 29/78 (37%)
Rbm19NP_083038.1 RRM1_RBM19 2..77 CDD:409980
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 85..126
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..267
RRM2_RMB19 293..364 CDD:409925
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 367..395
RRM3_RBM19 398..476 CDD:409983
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 481..504
RRM4_RBM19 584..655 CDD:409984
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 664..719 17/54 (31%)
RRM5_RBM19_like 722..801 CDD:409757 27/88 (31%)
RRM6_RBM19 824..902 CDD:409985 2/7 (29%)
Blue background indicates that the domain is not in the aligned region.

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