DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and SRSF2

DIOPT Version :9

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001182356.1 Gene:SRSF2 / 6427 HGNCID:10783 Length:221 Species:Homo sapiens


Alignment Length:150 Identity:33/150 - (22%)
Similarity:61/150 - (40%) Gaps:24/150 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 LYVTNLNFETTKDDLELHFSAAGTVKSIRIPK----KRRGGFAFVEMADLSSFQNAFQ-LHNTEL 175
            |.|.||.:.|:.|.|...|...|.|..:.||:    |...|||||...|....::|.. :....|
Human    16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVL 80

  Fly   176 QGRNIKVQISEAGKKKSANK----------------KNIIKQKNRKLAEMRNEQKTFTKSGKFYD 224
            .||.::||::..|:...::.                :.....:.|:.:..|:..::.::|...|.
Human    81 DGRELRVQMARYGRPPDSHHSRRGPPPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYS 145

  Fly   225 KDLKKEKAKEMLARKRWRKK 244
            :...:.:.:   :|.|...|
Human   146 RSKSRSRTR---SRSRSTSK 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 RRM3_Prp24 114..184 CDD:240744 24/72 (33%)
SRSF2NP_001182356.1 RRM_SRSF2_SRSF8 16..88 CDD:409751 23/71 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 92..221 7/73 (10%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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