DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and RBMY1A1

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_005049.1 Gene:RBMY1A1 / 5940 HGNCID:9912 Length:496 Species:Homo sapiens


Alignment Length:170 Identity:41/170 - (24%)
Similarity:62/170 - (36%) Gaps:49/170 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 LYVTNLNFETTKDDLELHFSAAGTVKSIRIPKKRRG---GFAFVEMADLSSFQNAFQ-LHNTELQ 176
            |::..||.||.:..|:..|...|.:..:.:.|.|..   ||||:...:.:..:||.: ::...|.
Human    10 LFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLH 74

  Fly   177 GRNIKVQISEAGKKKSANKKNIIKQKNRKLAEMRNEQKTFTKSGKF------------------- 222
            |:.|||   |..||.|.....    :.|..|..||.    :.||..                   
Human    75 GKAIKV---EQAKKPSFQSGG----RRRPPASSRNR----SPSGSLRSARGSRGGTRGWLPSHEG 128

  Fly   223 ------YDKDLKKEKAKEMLARKRW---------RKKPAP 247
                  |..|||...::.::..||.         .||.||
Human   129 HLDDGGYTPDLKMSYSRGLIPVKRGPSSRSGGPPPKKSAP 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 25/84 (30%)
RRM 116..187 CDD:440488 21/74 (28%)
RBMY1A1NP_005049.1 RRM_RBMX_like 7..85 CDD:409816 22/77 (29%)
ELAV_HUD_SF <10..>182 CDD:273741 41/170 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 78..349 23/102 (23%)
dnaA 158..>316 CDD:455861 4/11 (36%)
RBM1CTR 174..218 CDD:400429
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 452..496
Blue background indicates that the domain is not in the aligned region.

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