DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and tra2b

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001006878.1 Gene:tra2b / 448667 XenbaseID:XB-GENE-5864557 Length:293 Species:Xenopus tropicalis


Alignment Length:197 Identity:46/197 - (23%)
Similarity:68/197 - (34%) Gaps:60/197 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 EGTYVDKED---GRNPSDPEDSKSEDEAKSDDEAAAEGSAASGAEEEESAENGQITSDQLSSLLR 106
            |..|.|:|.   .|:.|..:..||  .::|.:.:||...:..|:....|....:  ||..|...|
 Frog     6 EQNYADRESRSASRSGSARQSGKS--ASQSPNHSAARSRSKEGSRHSRSKTRSR--SDSRSRSRR 66

  Fly   107 GA-------------------------------------SKTNRHV-----------LYVTNLNF 123
            .:                                     |...|||           |.|..|:.
 Frog    67 SSRRHYTRSRTRSRSRRRSRSRSHSRDYRRRRSHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSL 131

  Fly   124 ETTKDDLELHFSAAGTVKSIRI----PKKRRGGFAFVEMADLSSFQNAFQLHN-TELQGRNIKVQ 183
            .||:.||...||..|.:..:.|    ..:|..||:||...::...:.|.:..| .||.||.|:|.
 Frog   132 YTTERDLREVFSKYGPISDVSIVYDQQSRRSRGFSFVYFENVDDAKEAKERANGMELDGRRIRVD 196

  Fly   184 IS 185
            .|
 Frog   197 FS 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 46/197 (23%)
RRM 116..187 CDD:440488 25/75 (33%)
tra2bNP_001006878.1 RRM_TRA2 121..200 CDD:409798 25/78 (32%)

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