DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and tra2a

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:XP_012819962.1 Gene:tra2a / 448073 XenbaseID:XB-GENE-492325 Length:341 Species:Xenopus tropicalis


Alignment Length:189 Identity:37/189 - (19%)
Similarity:61/189 - (32%) Gaps:61/189 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 SDPEDSKSEDEAKSDDEAAAEGSAASGAEEEESAENGQITSDQLSSLLRGASKTNRH-------- 114
            ||.|..:|...:||..|:|....:.|.:....::...:.:..:..|..:..|::.||        
 Frog     2 SDVEGRESRSRSKSPAESAPRVKSESRSRSRSASRASKRSESRSRSRSKSRSRSRRHSHRRYSRS 66

  Fly   115 ------------------------------------------------VLYVTNLNFETTKDDLE 131
                                                            .:.|..|:..||:.||.
 Frog    67 RSRSHSRKRRSKSRSYTPEYRRRRSRSHSPMSNRRRHNGSRANPDPNICIGVFGLSLYTTERDLR 131

  Fly   132 LHFSAAGTVKSIRIPKKRR----GGFAFVEMADLSSFQNAFQLHN-TELQGRNIKVQIS 185
            ..||..|.:..:.:...:|    .|||||....:...:.|.:..| .||.||.|:|..|
 Frog   132 EVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIEDSREAMEHANGMELDGRRIRVDYS 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 37/189 (20%)
RRM 116..187 CDD:440488 24/75 (32%)
tra2aXP_012819962.1 RRM_TRA2A 110..193 CDD:410047 24/81 (30%)

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