DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and eif4h

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001184257.1 Gene:eif4h / 402996 ZFINID:ZDB-GENE-010328-19 Length:262 Species:Danio rerio


Alignment Length:233 Identity:48/233 - (20%)
Similarity:84/233 - (36%) Gaps:68/233 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 NFDDQKRREIFEGTYVDKEDGRNPSDPEDSKSEDEAKSDDEAAAEGSAASGAEEEESAENGQITS 98
            |:||:.|      .|.....||.|..                   |...||..:::     ::.:
Zfish     6 NYDDRDR------AYGSFGGGRGPRG-------------------GGGPSGPRKQK-----ELPT 40

  Fly    99 DQLSSLLRGASKTNRHVLYVTNLNFETTKDDLELHFSAAGTVKSIRIPKKRR----GGFAFVEMA 159
            :.            .:..||.||.|.|.:.|::..|... :|:|:|:.:.:.    .||.:||..
Zfish    41 EP------------PYTAYVGNLPFNTVQGDIDAIFRDL-SVRSVRLVRDKETDKFKGFCYVEFD 92

  Fly   160 DLSSFQNAFQLHNTELQGRNIKVQISEAGKKKSANKKNIIKQKNRKLAEM-------RNEQKTFT 217
            ||.|.:.|.......|..|:::|.|:|..:::........::.:|.....       |:.::.|.
Zfish    93 DLESLKEALTYDGALLGDRSLRVDIAEGRRQERGGGGFGFRKDDRGRGGSRGARGGGRDSREDFD 157

  Fly   218 KSG-------KFYDKDLKKEKAKEMLARKRWRKKPAPR 248
            :||       .|.|.|.       |..|.|...:|..|
Zfish   158 QSGGGAAGEMGFRDDDF-------MGGRSRGGGRPGDR 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 34/164 (21%)
RRM 116..187 CDD:440488 23/74 (31%)
eif4hNP_001184257.1 RRM_eIF4H 39..118 CDD:409835 22/91 (24%)

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