DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and Slirp

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_081234.2 Gene:Slirp / 380773 MGIID:1916394 Length:112 Species:Mus musculus


Alignment Length:94 Identity:24/94 - (25%)
Similarity:41/94 - (43%) Gaps:8/94 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 SSLLRG----ASKTNRHVLYVTNLNFETTKDDLELHFSAAGTVKSIRIPKKRRGGF----AFVEM 158
            :|.::|    .|.|.|.:.:|..:.:.....:|..||:..|.|:...:|..:..||    .:|:.
Mouse     3 ASAIKGLSALRSSTGRPIAFVRKIPWTAAASELREHFAQFGHVRRCTVPFDKETGFHRGMGWVQF 67

  Fly   159 ADLSSFQNAFQLHNTELQGRNIKVQISEA 187
            :.....|||.|..:..:.|..|.||...|
Mouse    68 SSQEELQNALQQEHHIIDGVKIHVQAQRA 96

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 24/94 (26%)
RRM 116..187 CDD:440488 18/74 (24%)
SlirpNP_081234.2 RRM_SLIRP 21..92 CDD:409688 16/70 (23%)

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