DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and Srsf10

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:XP_006239282.1 Gene:Srsf10 / 362630 RGDID:1311067 Length:262 Species:Rattus norvegicus


Alignment Length:154 Identity:39/154 - (25%)
Similarity:70/154 - (45%) Gaps:34/154 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 LYVTNLNFETTKDDLELHFSAAGTVKSIRIP----KKRRGGFAFVEMADLSSFQNAFQLHNTE-- 174
            |:|.|:..:|..:||...|...|.:..:.:|    .:|..|||:|:..|:...::|  |||.:  
  Rat    12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDA--LHNLDRK 74

  Fly   175 -LQGRNIKVQISEAGKKKSANKKNIIKQKNRKLAEMRNEQKTFTKSGKFYDKDLKKEKAKEMLAR 238
             :.||.|::|.:: |.:|:.|:   :|.|         |.:....|.::.|.|..:........|
  Rat    75 WICGRQIEIQFAQ-GDRKTPNQ---MKAK---------EGRNVYSSSRYDDYDRYRRSRSRSYER 126

  Fly   239 KR---------WRKKPAP---RPT 250
            :|         :|:..:|   |||
  Rat   127 RRSRSRSFDYNYRRSYSPRNSRPT 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 26/87 (30%)
RRM 116..187 CDD:440488 23/77 (30%)
Srsf10XP_006239282.1 RRM_SF 5..99 CDD:473069 27/92 (29%)

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