DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and eif4bb

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:XP_005166071.1 Gene:eif4bb / 336619 ZFINID:ZDB-GENE-030131-8563 Length:632 Species:Danio rerio


Alignment Length:245 Identity:52/245 - (21%)
Similarity:91/245 - (37%) Gaps:68/245 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 TVNDDSADLLGNFDDQKRREIFEGTYVDKEDGRN--PSDPEDSKSEDEAKSDDEAAAEGS-AASG 84
            |:||..||                     |.|.|  ||.|....:....::||   .||. :.|.
Zfish    16 TLNDFLAD---------------------ETGGNAPPSFPTTKATSWADETDD---LEGDVSTSW 56

  Fly    85 AEEEESAENGQITSDQLSSLLRGASKTN----------RHVLYVTNLNFETTKDDLELHFSAAGT 139
            ...|::.....|....|.:..|.|.:.|          .:..::.||.::.:::.:...|... .
Zfish    57 HTVEDTYRAPPIDRSILPTAPRAAREPNVDRSRLPRSPPYTAFLGNLPYDVSEESIRDFFRGL-A 120

  Fly   140 VKSIRIPK-----KRRGGFAFVEMADLSSFQNAFQLHNTELQGRNIKVQISEAGKKKSANKKNII 199
            :.::|:|:     :|..||.:.|..|:.|...|..|:...|..|.|:|.|::             
Zfish   121 ISAVRLPREPNNPERLKGFGYAEFDDIESLLRALSLNEENLGNRRIRVDIAD------------- 172

  Fly   200 KQKNRKLAEMRNEQKTFTKSGKFYDKDLKKEKAKEMLARKR---WRKKPA 246
             |.|.|      |:.:...||:  |:|..:.:..:....|.   ||.:|:
Zfish   173 -QSNDK------ERDSGMMSGR--DRDRDRGRGMDSGPDKTDSDWRARPS 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 35/178 (20%)
RRM 116..187 CDD:440488 18/75 (24%)
eif4bbXP_005166071.1 RRM_eIF4B 94..175 CDD:409836 19/95 (20%)
PTZ00459 <429..532 CDD:185638
Blue background indicates that the domain is not in the aligned region.

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