DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and rbm14a

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001108616.1 Gene:rbm14a / 323721 ZFINID:ZDB-GENE-050522-496 Length:471 Species:Danio rerio


Alignment Length:121 Identity:34/121 - (28%)
Similarity:55/121 - (45%) Gaps:8/121 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 LYVTNLNFETTKDDLELHFSAAGTVKSIRIPKKRRGGFAFVEMADLSSFQNAFQ-LHNTELQGRN 179
            |:|.||:.|||:|||...|:..|.|..|.:.::    ||||.:....:..:|.: |:..|.:||:
Zfish     9 LFVGNLDLETTQDDLIALFAPFGEVVHITVLRQ----FAFVHLQGEGAADSAIRDLNGREYRGRS 69

  Fly   180 IKVQISEAGKKKSANKKNIIKQKNRKLAEMRNEQKTFTKSGKFYDKDLKKEKAKEM 235
            :.|   |..|.:..|...:..........:.:....|:..||..|.|..|.|...:
Zfish    70 LVV---EESKGRPLNSTKVFVGNLCASCSVEDLYDLFSPYGKVLDCDKVKTKPSSL 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 27/81 (33%)
RRM 116..187 CDD:440488 24/71 (34%)
rbm14aNP_001108616.1 RRM_SF 7..75 CDD:473069 25/72 (35%)
RRM_SF 84..156 CDD:473069 7/39 (18%)

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