Protein Alignment CG3594 and hnrnpaba

DIOPT Version :10

• Sequence 1: NP_523855.1
• Gene: CG3594 / 37964
• FlyBaseID: FBgn0035063
• Length: 250
• Species: Drosophila melanogaster
• Sequence 2: NP_997752.2
• Gene: hnrnpaba / 321466
• ZFINID: ZDB-GENE-030131-185
• Length: 340
• Species: Danio rerio
• Alignment Length: 224
• Identity: 57/224 - (25%)
• Similarity: 92/224 - (41%)
• Gaps: 34/224 - (15%)

  Fly    52 EDGRNPSDPED----SKSEDEAKSDDEAAAEGSA-ASGAEEEESAENGQITSDQLSSLLRGASKT 111
            |...|..:.||    :...|:...|.:|.|:|:| |.|...::.|:.|||.:.      :|....
Zfish    10 ETSLNGHEGEDDLNGAGQYDQGNGDAQAGAQGNAGADGTAGDDGADGGQIDAS------KGEEDA 68

  Fly   112 NRHVLYVTNLNFETTKDDLELHFSAAGTVKSIRI---PKKRRG-GFAFVEMADLSSFQNAFQLHN 172
            .:  ::|..|:::|:|.||:.:||..|.|....|   |...|. ||.|:...:.|..........
Zfish    69 GK--MFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDPNTGRSRGFGFILFKEPSGVDKVLAQKE 131

  Fly   173 TELQGRNIKVQISEAGKKKSANKKNIIKQKNRKLAEMR--------NEQKTF-----TKSGK--- 221
            ..|.||.|..:.:.|.||:.. ||..:...|.:..|.|        .|.:|.     .||.|
Zfish   132 HRLDGRQIDPKKAMAMKKEPV-KKIFVGGLNPETTEERIREYFGAFGEIETIELPMDPKSNKRRG 195

  Fly   222 FYDKDLKKEKAKEMLARKRWRKKPAPRPT 250
            |.....|:|:|.:.:..|::......:.|
Zfish   196 FVFITFKEEEAVKKILEKKYHNVSGTKDT 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3594	NP_523855.1	SF-CC1	36..>197	CDD:273721	42/153 (27%)
		RRM	116..187	CDD:440488	21/74 (28%)
hnrnpaba	NP_997752.2	CBFNT	1..69	CDD:311868	17/64 (27%)
		RRM1_hnRNPAB	65..144	CDD:410151	21/80 (26%)
		RRM2_hnRNPAB	149..228	CDD:409997	17/77 (22%)