DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and HNRNPD

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_112738.1 Gene:HNRNPD / 3184 HGNCID:5036 Length:355 Species:Homo sapiens


Alignment Length:231 Identity:57/231 - (24%)
Similarity:89/231 - (38%) Gaps:63/231 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 SKSEDE----AKSDDEAAAEGS-------AASGAEEEESAENGQITSDQLSSLLRGASKTN---- 112
            |..|.|    |.:...|||.||       .|||..|..|||:.....|        |||..    
Human    22 SAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEGAKID--------ASKNEEDEG 78

  Fly   113 ------RH-----------VLYVTNLNFETTKDDLELHFSAAG-----TVKSIRIPKKRRGGFAF 155
                  ||           .:::..|:::|||.||:.:||..|     |:|...|..:.| ||.|
Human    79 HSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSR-GFGF 142

  Fly   156 VEMADLSSFQNAFQLHNTELQGRNIKVQISEAGKKKSANKKNII--------KQKNRKL------ 206
            |...:..|..........:|.|:.|..:.::|.|.|...||..:        ::|.|:.      
Human   143 VLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGE 207

  Fly   207 ---AEMRNEQKTFTKSGKFYDKDLKKEKAKEMLARK 239
               .|:..:.||..:.|..:....::|..|:::.:|
Human   208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 47/170 (28%)
RRM 116..187 CDD:440488 21/75 (28%)
HNRNPDNP_112738.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..92 22/77 (29%)
CBFNT <60..78 CDD:311868 7/25 (28%)
RRM1_hnRNPD 99..172 CDD:410150 21/73 (29%)
RRM2_hnRNPD 183..257 CDD:241027 10/61 (16%)

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