DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and Rbm34

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001014037.1 Gene:Rbm34 / 307956 RGDID:1310161 Length:428 Species:Rattus norvegicus


Alignment Length:331 Identity:78/331 - (23%)
Similarity:125/331 - (37%) Gaps:126/331 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 QRTVNDDSADLLGNFD--------------DQKRREIFEGTYVD-----KEDGRN----PSDPED 62
            :|..|.:||  |.|.|              .|.|.::.:|..:|     .||||.    |.:||:
  Rat   114 KRLANRESA--LANADLEEIRQDQGQGRRRSQSRGKVTDGEALDVALSLNEDGRQRTKVPLNPEE 176

  Fly    63 SKSEDE--------------------------------------------------------AKS 71
            .:.::|                                                        .||
  Rat   177 ERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLSKKLAAIKRKFHPDQKS 241

  Fly    72 --------DDEAAAEGSAASGAEEEESAENGQITSDQLSSLLRGASKTNRHVLYVTNLNFETTKD 128
                    ::.|||:....:||   :.||..:|..|..|..   ||:..|.| :|.||.:...:.
  Rat   242 INAYVVFKEERAAAKALQRNGA---QIAEGFRIRVDLASET---ASRDKRSV-FVGNLPYRVDES 299

  Fly   129 DLELHFSAAGTVKSIRI---PKKRRG-GFAFVEMADLSSFQNAFQLHNTELQGRNIKVQISEAGK 189
            .||.||...|::.::||   |....| ||.:|...:..:...|.:|:|:||.||.::|.      
  Rat   300 ALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRVM------ 358

  Fly   190 KKSANKKNIIKQKN-----RKLAEMRNEQKTFT-KSGKFYDKD---------LKKEKAKEMLARK 239
             :|.||:. :||:|     :|......::..|| |.||.:.|:         :||:|.::   :|
  Rat   359 -RSVNKEK-LKQQNSNPSVKKDGSKSKQRLNFTSKEGKSHSKNAFIGEKAVLMKKKKGQK---KK 418

  Fly   240 RWRKKP 245
            ...|||
  Rat   419 GQTKKP 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 55/251 (22%)
RRM 116..187 CDD:440488 23/74 (31%)
Rbm34NP_001014037.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..106
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..152 3/24 (13%)
RRM1_RBM34 183..274 CDD:409828 10/93 (11%)
RRM2_RBM34 286..358 CDD:409829 23/72 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 361..428 19/68 (28%)
Blue background indicates that the domain is not in the aligned region.

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