Protein Alignment CG3594 and sgnh-1

DIOPT Version :10

• Sequence 1: NP_523855.1
• Gene: CG3594 / 37964
• FlyBaseID: FBgn0035063
• Length: 250
• Species: Drosophila melanogaster
• Sequence 2: NP_500666.2
• Gene: sgnh-1 / 177260
• WormBaseID: WBGene00020354
• Length: 177
• Species: Caenorhabditis elegans
• Alignment Length: 141
• Identity: 41/141 - (29%)
• Similarity: 64/141 - (45%)
• Gaps: 26/141 - (18%)

  Fly    55 RNPSDPEDSKSEDEAKSDDEA--AAEGSAASGAEEEESAENGQITSDQLSSLLRGASKTNRHVLY 117
            |:.:..||..:.:|.:...:|  |::...|..|||:|                    ||:...:|
 Worm     5 RSNNSNEDFVTAEEMELLKQALSASKKYMAPTAEEQE--------------------KTDARSVY 49

  Fly   118 VTNLNFETTKDDLELHFSAAGTVKSIRIPKKRRGG----FAFVEMADLSSFQNAFQLHNTELQGR 178
            |.|:::::|..::|.||:..|.|..:.|||.:..|    |||||...|.|.|.|..|..|..:.|
 Worm    50 VGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLALVLSGTMFRNR 114

  Fly   179 NIKVQISEAGK 189
            .|.|.:....|
 Worm   115 KIMVTLKRTNK 125

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3594	NP_523855.1	SF-CC1	36..>197	CDD:273721	41/141 (29%)
		RRM	116..187	CDD:440488	27/74 (36%)
sgnh-1	NP_500666.2	RRM_II_PABPs	47..119	CDD:409747	26/71 (37%)