DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and rsp-8

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001255142.1 Gene:rsp-8 / 176613 WormBaseID:WBGene00004705 Length:309 Species:Caenorhabditis elegans


Alignment Length:133 Identity:34/133 - (25%)
Similarity:51/133 - (38%) Gaps:26/133 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 EDSKSED-EAKSDDEAAAEGSAASGAEEEESAENGQITSDQLSSLLRGASKTNRHVLYVTNLNFE 124
            |.|:|.. .|:........|....|..::...||.|            .||    .|.|.||:..
 Worm    38 ESSRSRSPRARYGGGGGGGGGGGRGRNQQYDRENPQ------------PSK----CLGVFNLSSY 86

  Fly   125 TTKDDLELHFSAAGTVKSIRI----PKKRRGGFAFVE---MADLSSFQNAFQLHNTELQGRNIKV 182
            ||:.||...|...|.:....:    |.....||.|:.   :.|.::.::  :|.||:|.|..|:|
 Worm    87 TTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARD--KLCNTDLDGHKIRV 149

  Fly   183 QIS 185
            ..|
 Worm   150 DFS 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 34/133 (26%)
RRM 116..187 CDD:440488 23/77 (30%)
rsp-8NP_001255142.1 RRM_TRA2 75..154 CDD:409798 25/84 (30%)

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