DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and EEED8.4

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_495022.2 Gene:EEED8.4 / 173921 WormBaseID:WBGene00017135 Length:191 Species:Caenorhabditis elegans


Alignment Length:200 Identity:41/200 - (20%)
Similarity:75/200 - (37%) Gaps:77/200 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SDSGSDYEVEAFFNPKRVQRTVNDDSADLLGNFDDQKRREIFEGTYVDKEDGRNPSDPEDSKSED 67
            ::|.|.:|:|           :..:|| :|....::..:.:....||       |...|:.|:.|
 Worm     8 NNSNSHFEME-----------IEAESA-ILQQIQNKMAKHLESAAYV-------PPTEEEQKAID 53

  Fly    68 EAKSDDEAAAEGSAASGAEEEESAENGQITSDQLSSLLRGASKTNRHVLYVTNLNFETTKDDLEL 132
             |||                                            :::.|::|.:|.:::|.
 Worm    54 -AKS--------------------------------------------VFIGNVDFNSTIEEIEE 73

  Fly   133 HFSAAGTVKSIRIPK----KRRGGFAFVEMADLSSFQNAFQLHNTELQGRNIKVQISEAGKKKSA 193
            ||...|.:....|||    |::..||::|..|.||.:||..::.:..:.|.|.|         :|
 Worm    74 HFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPIVV---------TA 129

  Fly   194 NKKNI 198
            .:.||
 Worm   130 KRTNI 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 32/164 (20%)
RRM 116..187 CDD:440488 22/74 (30%)
EEED8.4NP_495022.2 RRM_II_PABPs 56..128 CDD:409747 23/124 (19%)

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