DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3594 and SRSF12

DIOPT Version :10

Sequence 1:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_542781.3 Gene:SRSF12 / 135295 HGNCID:21220 Length:261 Species:Homo sapiens


Alignment Length:150 Identity:33/150 - (22%)
Similarity:70/150 - (46%) Gaps:19/150 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 LYVTNLNFETTKDDLELHFSAAGTVKSIRIP----KKRRGGFAFVEMADLSSFQNA-FQLHNTEL 175
            |::.|:...|..:||...|...|.:..:.||    .:|..|||:|:..|:...::| :.|:...:
Human    12 LFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNRKWV 76

  Fly   176 QGRNIKVQISEAGKKKSANKKNIIKQK------NRKLAEMRNEQKTFTKSGKFYDKDLKKEKAKE 234
            .||.|::|.::..:|.....|:  |::      :.:.:...::::|.::|..:.....:.:..||
Human    77 CGRQIEIQFAQGDRKTPGQMKS--KERHPCSPSDHRRSRSPSQRRTRSRSSSWGRNRRRSDSLKE 139

  Fly   235 MLARK------RWRKKPAPR 248
            ...|:      :.|.|..||
Human   140 SRHRRFSYSQSKSRSKSLPR 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 22/85 (26%)
RRM 116..187 CDD:440488 21/75 (28%)
SRSF12NP_542781.3 RRM_SRSF10_SRSF12 10..93 CDD:240758 22/80 (28%)
PABP-1234 <12..211 CDD:130689 32/149 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 86..261 11/75 (15%)

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