DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment egg and SUVH3

DIOPT Version :9

Sequence 1:NP_611966.3 Gene:egg / 37962 FlyBaseID:FBgn0086908 Length:1262 Species:Drosophila melanogaster
Sequence 2:NP_565056.1 Gene:SUVH3 / 843641 AraportID:AT1G73100 Length:669 Species:Arabidopsis thaliana


Alignment Length:919 Identity:198/919 - (21%)
Similarity:288/919 - (31%) Gaps:374/919 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   439 LDIEPSDYVHEVPPPGEIVRPPIQLGETYYAVKNKAIASWVSIKVIEFTESTAINGNTMKSYKIR 503
            |||:|...:..|.|.|. ..||. :|...:...:...:|:......:.|..|.....|.      
plant    22 LDIKPLRSLKPVFPNGN-QGPPF-VGCPPFGPSSSEYSSFFPFGAQQPTHDTPDLNQTQ------ 78

  Fly   504 YLNTPYQMIKTVTAKHIAYFEPP------PVRL-----TIGT-RVIAYFDGTTLSRGKDKGVVQS 556
              |||           |..|.||      |.:.     :.|| |.:....|||..:.|:|..|  
plant    79 --NTP-----------IPSFVPPLRSYRTPTKTNGPSSSSGTKRGVGRPKGTTSVKKKEKKTV-- 128

  Fly   557 AFYPGIIAEPLKQANRYRYLIFYDDGYTQYVPHRDVRLVCQASEKVWEDVHAASRDFIQKYVEKY 621
                         ||.               |:.||::|.:.|......:.||.|:....|:   
plant   129 -------------ANE---------------PNLDVQVVKKFSSDFDSGISAAEREDGNAYL--- 162

  Fly   622 SVDRPMVQCTRGQSMTTESNGTWLYARVIDIDCSLVLMQFEGDKNHTEWIYRGSLRLGPVFRETQ 686
                                            .|.|||:|:..:.          ||..|  |..
plant   163 --------------------------------VSSVLMRFDAVRR----------RLSQV--EFT 183

  Fly   687 NNMNSSSAQQLRVPRRTEPFIRYTKEMESSSKVNQQMRA------------FAR----------- 728
            .:..|.:|..|               |.:..:.|.:.|.            |:|           
plant   184 KSATSKAAGTL---------------MSNGVRTNMKKRVGTVPGIEVGDIFFSRIEMCLVGLHMQ 233

  Fly   729 ----------KSSASAQNNALAAASSAATPAGGR-------------TNAGGVSTSNSASAVRHL 770
                      |:.:..::.|.:..||      ||             :..||.:..|..::.:.|
plant   234 TMAGIDYIISKAGSDEESLATSIVSS------GRYEGEAQDPESLIYSGQGGNADKNRQASDQKL 292

  Fly   771 NNSTIYVDDENRPKGHVVYF----------TAKRNLPPKMYKCHE---------CSPNCLFKIVH 816
            ....:.:::..| ||:.|..          |.|..:...:|...|         |: ...:|:|.
plant   293 ERGNLALENSLR-KGNGVRVVRGEEDAASKTGKIYIYDGLYSISESWVEKGKSGCN-TFKYKLVR 355

  Fly   817 RLDSYSPLAKPLLSGWERLVMRQKTKKSVVYKGPCGKSLRSLAEVHRYLRATENVLNVDNFDFTP 881
            :     |...|....|:.:   ||.|:.:..:.  |..|                         |
plant   356 Q-----PGQPPAFGFWKSV---QKWKEGLTTRP--GLIL-------------------------P 385

  Fly   882 DLKCLAEYSIDPSIVKDTDISKGQEKMAIPLVNYYDNTLPPPCTYAKQRIPTEGVHLNLDEEFLL 946
            ||...|| |...|:|.|.|..||                |...||...        |...|.|.|
plant   386 DLTSGAE-SKPVSLVNDVDEDKG----------------PAYFTYTSS--------LKYSETFKL 425

  Fly   947 C-----CDCEDDCS-DKSKCACWQLTVAGVRYCN-----PKKPIEEIGYQYKRLHEHVPTGIYEC 1000
            .     |.|...|| ....|:|.:.....:.|.|     .::|:                 ||||
plant   426 TQPVIGCSCSGSCSPGNHNCSCIRKNDGDLPYLNGVILVSRRPV-----------------IYEC 473

  Fly  1001 NSRCKCKKNCLNRVVQFSLEMKLQVFKTSNRGWGLRCVNDIPKGAFICIYAGHLLTETMANEGGQ 1065
            ...|.|..:|.|||:|..|:.:|:||||.|||||||..:.:..|:|||.|||.:  :...|..|.
plant   474 GPTCPCHASCKNRVIQTGLKSRLEVFKTRNRGWGLRSWDSLRAGSFICEYAGEV--KDNGNLRGN 536

  Fly  1066 DAGDEYFADLDYIEVAEQLKEGYESEVDHSDPDAEEDNGGPDAEDDDDFRPNYHYQRKIKRSSRS 1130
            ...|.|..|..  .|....|..||.|:...||                                 
plant   537 QEEDAYVFDTS--RVFNSFKWNYEPELVDEDP--------------------------------- 566

  Fly  1131 GSTQNSSTQSSELDSQERAVINFN-PNADLDETVRENSVRRLFGKDEAPYIMDAKTTGNLGRYFN 1194
                  ||:..|         .|| |                     :|.::.||..||:.|:.|
plant   567 ------STEVPE---------EFNLP---------------------SPLLISAKKFGNVARFMN 595

  Fly  1195 HSCSPNLFVQNVFVDTHDLRFPWVAFFSAAHIRSGTELTWNYNYEVGVVP------GKVLY---- 1249
            ||||||:|.|.|..:.:......:|||:..||....|||::|    |:.|      ..:|:    
plant   596 HSCSPNVFWQPVIREGNGESVIHIAFFAMRHIPPMAELTYDY----GISPTSEARDESLLHGQRT 656

  Fly  1250 CQCGAPNCR 1258
            |.||:..||
plant   657 CLCGSEQCR 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eggNP_611966.3 HMT_MBD 823..879 CDD:238689 8/55 (15%)
Pre-SET 901..1013 CDD:282838 25/122 (20%)
SET 1022..1239 CDD:214614 62/217 (29%)
SUVH3NP_565056.1 SRA 203..359 CDD:197742 25/168 (15%)
SET 410..638 CDD:394802 89/329 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X219
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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