DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment egg and SUVR4

DIOPT Version :9

Sequence 1:NP_611966.3 Gene:egg / 37962 FlyBaseID:FBgn0086908 Length:1262 Species:Drosophila melanogaster
Sequence 2:NP_187088.2 Gene:SUVR4 / 819593 AraportID:AT3G04380 Length:492 Species:Arabidopsis thaliana


Alignment Length:524 Identity:120/524 - (22%)
Similarity:186/524 - (35%) Gaps:163/524 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   793 KRNLPPKMYKCHECSPNCLFKIVHRLDSYSPLAKPLLSGWERLVMRQKTKKSV-VYKGPCGKSLR 856
            ::.:|..|....|...|..:   .:||:|:.|...:.|      :..:.|:|. ...|..||:|:
plant    44 EKTMPVLMKLLEEAGGNWSY---IKLDNYTALVDAIYS------VEDENKQSEGSSNGNRGKNLK 99

  Fly   857 SL--------------AEVHRYLRATENVLNVDNFDFTPDLKCLAEYSIDPSIVKDTDISKGQEK 907
            .:              |.....::..:....:.|.|.....|.           :..||:||.|.
plant   100 VIDSPATLKKTYETRSASSGSSIQVVQKQPQLSNGDRKRKYKS-----------RIADITKGSES 153

  Fly   908 MAIPLVNYYDNTLPPPCTYAKQRIPTEGVHLNL------DEEFLLCCDCEDDC-SDKSKCACWQL 965
            :.||||:...:...|..||....|..:..:|::      ||:  .|.:|:.:| |....|.|.:.
plant   154 VKIPLVDDVGSEAVPKFTYIPHNIVYQSAYLHVSLARISDED--CCANCKGNCLSADFPCTCARE 216

  Fly   966 TVAGVRYCNP--------------KKPIEEIGYQY------KRLHEHVPTG----------IYEC 1000
            |.....|...              ||..:.....|      :|.|:....|          |.||
plant   217 TSGEYAYTKEGLLKEKFLDTCLKMKKEPDSFPKVYCKDCPLERDHDKGTYGKCDGHLIRKFIKEC 281

  Fly  1001 NSRCKCKKNCLNRVVQFSLEMKLQVFKT-SNRGWGLRCVNDIPKGAFICIYAGHLLTETMANEGG 1064
            ..:|.|...|.|||||..:..:|||:.| ..:|||||.:.|:|||.|||.|.|.:||.|..    
plant   282 WRKCGCDMQCGNRVVQRGIRCQLQVYFTQEGKGWGLRTLQDLPKGTFICEYIGEILTNTEL---- 342

  Fly  1065 QDAGDEYFADLDYIEVAEQLKEGYESEVDHSDPDAEEDNGGPDAEDDDDFRPNYHYQRKIKRSSR 1129
                                                                   |.|.::.|| 
plant   343 -------------------------------------------------------YDRNVRSSS- 351

  Fly  1130 SGSTQNSSTQSSELDSQERAVINFNPNADLDETVRENSVRRLFGKDEAPYIMDAKTTGNLGRYFN 1194
                 ...|....||:      ::....||              |||....:||...||:.|:.|
plant   352 -----ERHTYPVTLDA------DWGSEKDL--------------KDEEALCLDATICGNVARFIN 391

  Fly  1195 HSC-SPNLFVQNVFVDTHDLRFPWVAFFSAAHIRSGTELTWNY--NYEVGVVPGKVLYCQCGAPN 1256
            |.| ..|:....:.::|.|..:..:|||:...:::..||||:|  ::.....|.|...|.||:.:
plant   392 HRCEDANMIDIPIEIETPDRHYYHIAFFTLRDVKAMDELTWDYMIDFNDKSHPVKAFRCCCGSES 456

  Fly  1257 CRLR 1260
            ||.|
plant   457 CRDR 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eggNP_611966.3 HMT_MBD 823..879 CDD:238689 10/70 (14%)
Pre-SET 901..1013 CDD:282838 35/148 (24%)
SET 1022..1239 CDD:214614 52/220 (24%)
SUVR4NP_187088.2 WIYLD 26..82 CDD:287421 9/46 (20%)
Pre-SET 147..294 CDD:282838 35/148 (24%)
SET 304..441 CDD:214614 52/221 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X219
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.