DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment egg and Nsd2

DIOPT Version :9

Sequence 1:NP_611966.3 Gene:egg / 37962 FlyBaseID:FBgn0086908 Length:1262 Species:Drosophila melanogaster
Sequence 2:NP_001178481.2 Gene:Nsd2 / 680537 RGDID:1307955 Length:1365 Species:Rattus norvegicus


Alignment Length:1559 Identity:295/1559 - (18%)
Similarity:463/1559 - (29%) Gaps:685/1559 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VDCL------ESSGSTVEDVQETPASREKSYGLPVRKGENSLES---------------PAEQAA 51
            |.|:      |..||.....|....:.|.|..|...:..|||:.               |||   
  Rat    16 VKCMKMKQAPEILGSANGKTQNCEVNHECSVFLSKAQLSNSLQEGVMQKFNGHDALPFLPAE--- 77

  Fly    52 KDVEIEELTHSEAIAATGSTRKQCPYGGKAPDEPG----KLADESEDRKGENTKAIASSPVLVAV 112
               ::::||             .|.:.|    |||    ||..|:::.||     |.:.|....:
  Rat    78 ---KLKDLT-------------SCVFNG----EPGAHDTKLCFETQEVKG-----IGTPPNTTPI 117

  Fly   113 DSDSSVELIESPVKFSSANESEKDPPKPDAVNEAAAKEAEEMTDSSISSPTSESFPEKDEKTNKE 177
            .:.|.    |..:|.:....:.|...:.....:.||    :|:.|      .|:..:.|.||.:.
  Rat   118 KNGSP----EIKLKITKTYMNGKPLFESSICGDGAA----DMSQS------EENGQKSDNKTRRN 168

  Fly   178 NEQEPPGMEVDQDVEESISRPAEEYKIENTLKGHKRISLTEIEEHKIVDKKDDVLEVELEKGTAP 242
            .::   .::.|..:|:.:...|...||.:.            |:.||..||:          :.|
  Rat   169 RKR---SIKYDSLLEQGLVEAALVSKISSP------------EDKKIPVKKE----------SCP 208

  Fly   243 KAAEDEKLNALLSDGDVFYDK-------ECVNC------NCTKLHKQYVLANMATLNFYQVLRKS 294
            .:..|..|....:.||:.:.|       .|:..      |.|||..|               :||
  Rat   209 NSGRDRDLLLKYNVGDLVWSKVSGYPWWPCMVSADPLLHNHTKLKGQ---------------KKS 258

  Fly   295 SKQQFLCMGCHDTAMDLYEEYAGQLMAKQPLLLKDFHQDHADFVALDSSDE-----EEEEKQ-PE 353
            ::|                 |..|.....|.....|.:   ..||.:..::     :|..|| |.
  Rat   259 ARQ-----------------YHVQFFGDAPERAWIFEK---SLVAFEGEEQFEKLCQESAKQAPT 303

  Fly   354 KSDFSKNKLQLIEDELDDAIKNVLNKVDFTAQLSWSKTILQAKADHLERQFALADVELEKVQTTA 418
            |::    |::|            |..:....:..|...|:||:      :.|...||..|.:.| 
  Rat   304 KAE----KIKL------------LKPISGRLRAQWEMGIVQAE------EAASMSVEERKAKFT- 345

  Fly   419 DKMHCALYNSCPVAHKHLPTLDIEPSDYVHEVPPPGEIVRPPIQLGETYYAVKNKAIASWVSIKV 483
                 .||..        ..|.:.|     :|.....|...|  |||    :.:.::|:      
  Rat   346 -----FLYVG--------DQLRLNP-----QVAKEAGIATEP--LGE----MVDSSVAN------ 380

  Fly   484 IEFTESTAINGNTMKSYKIRYLNTPYQMIKTVTAKHIAYFEPPPVRLTIGTRVIAYFDGTTLSRG 548
                |..|::..||:.                        |..||:    .|..|....:..::.
  Rat   381 ----EEAAVDPGTMRE------------------------EDIPVK----RRRRAKRSSSAENQE 413

  Fly   549 KDKGVVQSAFYPGIIAEPLK-------------QANRYR-------YLIFYDDGYTQYVPHRDVR 593
            .|.|..:|.......|||.:             .|:|.|       :|:|..       .||| .
  Rat   414 GDPGTEKSTPPKMADAEPKRGVGSPAGRKRSTGSASRSRKGDSAAQFLVFCQ-------KHRD-E 470

  Fly   594 LVCQ---ASEKVWEDVHAASRDFIQ-----KYVEKYSVDRPMVQC--------TRGQSMTTESNG 642
            :|.:   |||:..|::..:....:.     :|..|:|:   |:..        |.|:. .|.:..
  Rat   471 VVAEHPDASEEEIEELLGSQWSMLNEKQKARYNTKFSL---MISAQSEEDSGNTSGKK-RTHTKR 531

  Fly   643 TWLYARVIDIDCSLVLMQFEGDKNHTEWIYRGSLRLGPVFRETQNNMNSSSAQQLRVPRRTEPFI 707
            |......:|:: .....:...||:        |||.    |||..:..:          ||..: 
  Rat   532 TDDPPEDVDVE-DAPRKRLRTDKH--------SLRK----RETITDKTA----------RTSSY- 572

  Fly   708 RYTKEMESSSKVNQQMRAFARKSSASA------QNNALAAASSAATPAGGRTNAGGVSTSNSASA 766
               |.:|::|.:..|.   |.|:.:.|      :|.|.|.||||.          |.:.|:|.||
  Rat   573 ---KAIEAASSLKSQA---ATKNLSDACKPLKKRNRASATASSAL----------GFNKSSSPSA 621

  Fly   767 VRHLN-----------NSTIYVDDENRPKGHVVYFTAKRNLPPKM-YKCHECSPNCLFKIVHRLD 819
            ....|           .|.....||.:.:..|....::|.:..|. |.|..|             
  Rat   622 SLTENEVSDNPGDEPSESPYESADETQTEASVSSKKSERGMAAKKEYVCQLC------------- 673

  Fly   820 SYSPLAKPLLSGWERLVMRQKTKKSVVYKGPC---------GKSLR---------SLAEVHRYLR 866
                               :||...::.:|||         |.|.|         ..:.:|....
  Rat   674 -------------------EKTGSLLLCEGPCCGAFHLACLGLSQRPEGRFTCTECASGIHSCFV 719

  Fly   867 ATENVLN-----------------VDNFDFT---------PDLKCLAEYSIDPSIVKDTDISKGQ 905
            ..|:.:.                 |..:..|         |...|::.::.:||..:.   |||:
  Rat   720 CKESKMEVKRCMVNQCGKFYHEACVKKYPLTVFESRGFRCPLHSCMSCHASNPSNPRP---SKGK 781

  Fly   906 EKMAIPL-VNYY--DNTLPPPCT-YAKQRIPTEG-----------VHLNLDEEF-------LLCC 948
            ....:.. |.|:  |..|...|: .|...|...|           .|:|:...|       ||||
  Rat   782 MMRCVRCPVAYHGGDACLAAGCSVIASNSIICTGHFTARKGKRHHTHVNVSWCFVCSKGGSLLCC 846

  Fly   949 ---------DCE-----------DDCSDKSKC----ACWQLTVAGVRY-----CNPK-------K 977
                     ||.           :||....|.    ..| :.:...|:     |:||       |
  Rat   847 EACPAAFHPDCLSIEMPDGSWFCNDCRAGKKLHFQDIIW-VKLGNYRWWPAEVCHPKNVPPNIQK 910

  Fly   978 PIEEIG-------------------------------YQ-------------------------- 985
            ...|||                               ||                          
  Rat   911 MKHEIGEFPVFFFGSKDYYWTHQARVFPYMEGDRGSRYQGVRGIGRVFKNALQEAEARFNEIKLQ 975

  Fly   986 ---------------YKRLHEHVPTG---IYECN----SRCKCK----------KNCLNRVVQFS 1018
                           ||.:..:.|.|   ||..:    .:|.||          ..||||::.|.
  Rat   976 REARETQESERKPPPYKHIKVNKPYGKVQIYTADISEIPKCNCKPTDENPCGSDSECLNRMLMFE 1040

  Fly  1019 LEMKL--------------------QVFKTSNRGWGLRCVNDIPKGAFICIYAGHLLTETMANEG 1063
            ...::                    ::.||..:||||....||.||.|:..|.|.|:.|.     
  Rat  1041 CHPQVCPAGEYCQNQCFTKRQYPETKIIKTDGKGWGLVAKRDIRKGEFVNEYVGELIDEE----- 1100

  Fly  1064 GQDAGDEYFADLDYIEVAEQLKEGYESEVDHSDPDAEEDNGGPDAEDDDDFRPNYHYQRKIKRSS 1128
                           |...::|..:|:::.|                        .|...|    
  Rat  1101 ---------------ECMARIKYAHENDITH------------------------FYMLTI---- 1122

  Fly  1129 RSGSTQNSSTQSSELDSQERAVINFNPNADLDETVRENSVRRLFGKDEAPYIMDAKTTGNLGRYF 1193
                                                        .||.   |:||...||..|:.
  Rat  1123 --------------------------------------------DKDR---IIDAGPKGNYSRFM 1140

  Fly  1194 NHSCSPNLFVQNVFVDTHDLRFPWVAFFSAAHIRSGTELTWNYNYEVGVVPGKVLYCQCGAPNC 1257
            ||||.||.......|: .|.|   |..|:...|.:|||||:|||.:  .:..:...|:|||.||
  Rat  1141 NHSCQPNCETLKWTVN-GDTR---VGLFAVCDIPAGTELTFNYNLD--CLGNEKTVCRCGASNC 1198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eggNP_611966.3 HMT_MBD 823..879 CDD:238689 11/90 (12%)
Pre-SET 901..1013 CDD:282838 45/258 (17%)
SET 1022..1239 CDD:214614 49/236 (21%)
Nsd2NP_001178481.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351972
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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