DRSC/TRiP Functional Genomics Resources

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Protein Alignment egg and nsd1b

DIOPT Version :9

Sequence 1:NP_611966.3 Gene:egg / 37962 FlyBaseID:FBgn0086908 Length:1262 Species:Drosophila melanogaster
Sequence 2:XP_005173940.1 Gene:nsd1b / 564592 ZFINID:ZDB-GENE-080519-2 Length:1873 Species:Danio rerio


Alignment Length:1517 Identity:279/1517 - (18%)
Similarity:451/1517 - (29%) Gaps:609/1517 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VDCLESSG-------STVEDVQETPASREKSYGLPVRKGENSLESPAEQAAKDVEIEELTHSEAI 65
            |.||.:|.       ..:||.:.|   :|.|..|..:...:|.:||:.:.: ||....|......
Zfish   456 VKCLPASSRLMTRALKAMEDAEWT---KESSSDLETKNCVSSFDSPSLETS-DVHNSILLQKMPT 516

  Fly    66 AATGSTRKQCPYGGKAPDEPGKLADESEDRKGENTKAIASSPVLVAVDSDSSVELIESPVKFSSA 130
            ||                    :.|..||.| .:|.|..||.:|...|.:.||:         |.
Zfish   517 AA--------------------IHDLKEDSK-ISTHAKLSSELLCCKDDEHSVK---------SE 551

  Fly   131 NESEKDPPKPDAVNEAAAKEAEEMTDSSISSPTS------ESFPEKDEKTNKENEQEPPGMEVDQ 189
            :||......|.|.:.:..|:...:.|.| ||||.      :.....:|.:.|....|..|..:. 
Zfish   552 DESSLVSQAPCAFHSSTRKQNSHVNDLS-SSPTPSLHLNLKDMDNMNEISFKSLANEHSGQPLS- 614

  Fly   190 DVEESISRPAEEYKIENTLKGHKRISLTEIEEHKIVDKKDDVLEVELEKGTAPKAAEDEKLNALL 254
                  ..|...||....|...|       :.|...:|..:||.||....|  :...:|.|  |:
Zfish   615 ------FHPDSNYKFSTFLMMLK-------DMHDSREKDGNVLVVEPLPTT--ELINEEPL--LI 662

  Fly   255 SDGDVFYDKECVNCNCTKLHKQYVLANMATLNFYQVLRKSSKQQFLCMGCHDTAMDLYEEYAGQL 319
            |  ||..:|........|.....:..|.......:..::|||:..|.....|...::..:...:|
Zfish   663 S--DVKDEKATSKQKKVKPKTNVMSENHLASTISKTAQRSSKKISLKKKTTDIKANIDYKSFDKL 725

  Fly   320 MAKQPLLLKDFHQDHADFVALDSSDEEEEEKQPEKSD-FSKNKLQLIEDELDDAIKNVLNKVDFT 383
            ::...|..|:...:.:..|         .:|:.:|.| .|:..:.::|.       |.::|.:..
Zfish   726 ISAHRLTSKEAETNFSANV---------PKKRWQKFDQVSEKTVHIVEG-------NCIHKTERV 774

  Fly   384 AQLSWSKTILQAKADHLERQFALADVELEKV--------QTTADKMHCALYNSCPVAHKHLPTLD 440
            :..:                   .||.::..        :||::.:.|...| |...        
Zfish   775 SSEN-------------------CDVSMDGTNKSCFFGPETTSNALECNQGN-CQNT-------- 811

  Fly   441 IEPSDYVHEVPPPGEIVRPP----IQLGETY---YAVKNKAIASWVSIKVIE---FTESTAINGN 495
                    |.|...:.:|.|    |:..|.|   ::.|.||.....|:..||   .:|..|...:
Zfish   812 --------EAPTECKRIRKPSKRLIEWTEEYDQLFSAKKKAKKKPDSVTKIENQKCSEPVAKTYD 868

  Fly   496 TMK-------------------------SYKIRYLNT-PYQMIKTVTAKHIAYFEPPPVRL---- 530
            .:|                         |.....:|| |.|..:.::|:.:.   |||..:    
Zfish   869 EVKQKPQVTEQDVSRRLPELQTPPPEDQSQSTPLINTLPCQESQVLSAETLT---PPPEIIPSPC 930

  Fly   531 -TIGTR-------VIAYFDGTTLSRGKDKGVVQSAFYPGIIAEPLKQANRYRYLIFYDDGYTQYV 587
             .|..|       .:|..|...|:..:.:...:......|.|||:                  .:
Zfish   931 DNISNRDQLQRQNPVAVGDSVCLNSKRQRKPTKKILESSIEAEPI------------------LI 977

  Fly   588 PHRDVRLVCQASEKVWEDVHAASRDFIQ---KYVEKYSVDR------PMVQCTRGQSMTTESNGT 643
            |.|.::     |.|:....|:.:....|   |...|.|::.      ||::.|.           
Zfish   978 PKRKMK-----SMKICSSGHSTNSGVEQQSSKSKNKLSIESSDPPSDPMLKSTE----------- 1026

  Fly   644 WLYARVIDIDCSLVLMQFEGDKNHTEWIYRGSLRLGPVFRETQNNMNSSSAQQ----LRVPRRTE 704
                  ::||.|..::|                           .:|:.||..    ||.     
Zfish  1027 ------MEIDVSPAVLQ---------------------------TINTESADDGSDTLRC----- 1053

  Fly   705 PFIRYTKEMESSSKVNQQMRAFARKSSASAQNNALAAASSAATPAGGRTNAGGVSTSNSASAVRH 769
                      |.|::.:....::.:...|..:..|..:...:...||.|     |...:...:..
Zfish  1054 ----------SGSQMTESSEFYSEREENSQSDKVLLDSRRLSEEKGGST-----SVKENVCPMCE 1103

  Fly   770 LNNSTIYVDDE------------NRPKGHVVYFTAKRNLPPKMYKCHECSPNCLFKIVHRLDSYS 822
            .....:..:.:            |.|             |...:.|.||:..     ||...:..
Zfish  1104 KQGDLLLCEGQCCGAFHPQCTGLNEP-------------PTGKFLCQECTSG-----VHSCFACK 1150

  Fly   823 PLAKPLLSGWERLVMRQKTKKSVVYKGPCGKSLRSLAEVHRYLRATENVLNVDNFDFTPDLKCLA 887
            .|.:.:     |..|.....|  .|.|.|..|......::|..|.             |...||:
Zfish  1151 RLGEDV-----RRCMVPGCGK--FYHGECAASHAPTVPLNRAFRC-------------PLHACLS 1195

  Fly   888 EYSIDPSIVKDTDISKGQ-------------EKMAIPL--VNYYDNTLPPPCTYAKQRIPTEGVH 937
            .:.::|:   :..::|||             ....||.  |...|:.:..|..:..::......|
Zfish  1196 CFILNPA---NPSVAKGQLTRCIRCPVAYHSSDFCIPAGSVTLTDSNIVCPNHFTPRKGCRNHEH 1257

  Fly   938 LNLDEEF-------LLCCDCEDDCSDKSKCACWQLTV-AGVRYCNP----KKP------------ 978
            :|:...|       ||||   :.|.......|..:.: .|..|||.    |||            
Zfish  1258 VNVSWCFVCSEGGSLLCC---ESCPAAFHRECLNIDMPEGSWYCNDCRAGKKPHYKEVVWVKVGR 1319

  Fly   979 ---------------------IEEIG---------------YQ---------------------- 985
                                 ..::|               ||                      
Zfish  1320 YRWWPAEVSNPKDIPENILRMKHDVGEFPVLFFGSNDYLWTYQARVFPYMEGDANSKEKMGKGVD 1384

  Fly   986 --------------------------------------YKRLHEHVPTG-----------IYECN 1001
                                                  ||::..:.|.|           |..||
Zfish  1385 STYKKALDEAALRFKELQAEKELRQLQEDRRNDKKPPPYKQIKVNKPFGKVLIISADLSEIPRCN 1449

  Fly  1002 SR------CKCKKNCLNRVVQFSLE--------------------MKLQVFKTSNRGWGLRCVND 1040
            .:      |.....|:||::.:...                    .:::.|:|.:||||||||:|
Zfish  1450 CKATDENPCGMDSECINRMLLYECHPQVCPAGERCQNQCFIKRQYCQVETFRTLSRGWGLRCVHD 1514

  Fly  1041 IPKGAFICIYAGHLLTETMANEGGQDAGDEYFADLDYIEVAEQLKEGYESEVDHSDPDAEEDNGG 1105
            |.||.||..|.|.::.|                            |...:.:.|    |:|:|.|
Zfish  1515 IKKGGFISEYVGEVIDE----------------------------EECRARIKH----AQENNIG 1547

  Fly  1106 PDAEDDDDFRPNYHYQRKIKRSSRSGSTQNSSTQSSELDSQERAVINFNPNADLDETVRENSVRR 1170
                       |::.                                    ..||          
Zfish  1548 -----------NFYM------------------------------------LTLD---------- 1555

  Fly  1171 LFGKDEAPYIMDAKTTGNLGRYFNHSCSPNLFVQNVFVDTHDLRFPWVAFFSAAHIRSGTELTWN 1235
               ||.   |:||...||..|:.||.|.||...|...|: .|.|   |..||...|.:|||||:|
Zfish  1556 ---KDR---IIDAGPKGNEARFMNHCCQPNCETQKWTVN-GDTR---VGLFSLTDIPAGTELTFN 1610

  Fly  1236 YNYEVGVVPGKVLYCQCGAPNC 1257
            ||.|. :..||.: |:|||.||
Zfish  1611 YNLEC-LGNGKTV-CKCGASNC 1630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eggNP_611966.3 HMT_MBD 823..879 CDD:238689 10/55 (18%)
Pre-SET 901..1013 CDD:282838 36/263 (14%)
SET 1022..1239 CDD:214614 57/216 (26%)
nsd1bXP_005173940.1 PWWP 132..>204 CDD:321985
TOP2c <652..1020 CDD:330395 76/451 (17%)
PHD_SF 1098..1140 CDD:328929 5/54 (9%)
PHD_SF 1145..1191 CDD:328929 11/65 (17%)
PHD_SF 1193..1245 CDD:328929 11/54 (20%)
PHD4_NSD1 1262..1301 CDD:277126 11/41 (27%)
WHSC1_related 1307..1401 CDD:99899 4/93 (4%)
AWS 1444..1494 CDD:197795 7/49 (14%)
SET 1497..1618 CDD:214614 58/220 (26%)
PHD5_NSD1 1668..1710 CDD:277129
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593781
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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