DRSC/TRiP Functional Genomics Resources

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Protein Alignment egg and Set8

DIOPT Version :10

Sequence 1:NP_611966.3 Gene:egg / 37962 FlyBaseID:FBgn0086908 Length:1262 Species:Drosophila melanogaster
Sequence 2:NP_650354.1 Gene:Set8 / 41743 FlyBaseID:FBgn0011474 Length:691 Species:Drosophila melanogaster


Alignment Length:329 Identity:75/329 - (22%)
Similarity:117/329 - (35%) Gaps:69/329 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 THSEAIAATGSTRK------QCPYGGKAPDEPGKLADESEDRKGENTKAIASSPVLVAVDSDSSV 118
            |.:.|:||..|.|:      |.||..:....|.:...:.:|            .::|.:|.|...
  Fly   398 TTTAAVAACKSRRRLNQPKPQAPYQPQLQKPPSQQQQQQQD------------DIVVVLDDDDDE 450

  Fly   119 ELIESPVK--FSSANESEKDPPKPDAVNEAAAKEAEEMTDSSISSPTSESFPEKDE------KTN 175
            ...|..|:  ..:|.|.|.....|...|...|.....:..:.:.|.|....|.|.:      .||
  Fly   451 GDDEDDVRALIKAAEERENQNKAPATANSNKAGMKTMLKPAPVKSKTKSKGPTKGQPPLPLAATN 515

  Fly   176 KENEQEPPGMEVDQDVEESISRPAEEYKIENTLKGHKRISLTEIEEHKIVDKKDDVLEVE--LEK 238
             .|.:......|.:.|.::.:...||:     ::|         .|..:::::.|.|:|.  :.|
  Fly   516 -GNREMTDFFPVRRSVRKTKTAVKEEW-----MRG---------LEQAVLEERCDGLQVRHFMGK 565

  Fly   239 GTAPKAAEDEKLNALLSD--GDVFYDKECVNCNCTKLHKQYVLANMATLNFYQVLRKSSKQQFLC 301
            |....|....|.|..:.:  ||:....|     ..:..|:|.|...|....|....||  ||:  
  Fly   566 GRGVVADRPFKRNEFVVEYVGDLISIGE-----AAEREKRYALDENAGCYMYYFKHKS--QQY-- 621

  Fly   302 MGCHDTAMD-------LYEEYAGQLMAKQPLLLKDFHQDHADFVALDSSD-EEEEEKQPEKSDFS 358
              |.|..:|       :....||.||.|..|:.:..|     .|.|...| |..||...:..|.|
  Fly   622 --CIDATVDTGKLGRLINHSRAGNLMTKVVLIKQRPH-----LVLLAKDDIEPGEELTYDYGDRS 679

  Fly   359 KNKL 362
            |..|
  Fly   680 KESL 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eggNP_611966.3 Tudor_SETDB1_rpt1 532..622 CDD:410453
Tudor_SETDB1_rpt2 630..684 CDD:410548
HMT_MBD 823..879 CDD:238689
SET_SETDB1 900..1262 CDD:380915
Set8NP_650354.1 SET_SETD8 539..678 CDD:380926 40/168 (24%)
Blue background indicates that the domain is not in the aligned region.

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