DRSC/TRiP Functional Genomics Resources

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Protein Alignment egg and set-6

DIOPT Version :9

Sequence 1:NP_611966.3 Gene:egg / 37962 FlyBaseID:FBgn0086908 Length:1262 Species:Drosophila melanogaster
Sequence 2:NP_510003.2 Gene:set-6 / 181371 WormBaseID:WBGene00008206 Length:708 Species:Caenorhabditis elegans


Alignment Length:706 Identity:137/706 - (19%)
Similarity:247/706 - (34%) Gaps:217/706 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   632 RGQSMTTESNGTWLYARVIDIDCSLVLMQFEGDKNHTEWIYRGSLRLGPVFRETQNNMNSSSAQQ 696
            |..|:::.||.:        ::.|:::...:.:...||             |..|..::.:.:..
 Worm    51 RNHSLSSTSNSS--------VERSIIITISDDESEATE-------------RNQQEVVDRAISNN 94

  Fly   697 LRVPRR--TEPFIR-YTKEMESSSKVNQQMRAFARKSSASAQNNALAAASSAATPAGGRTNAGGV 758
            |...||  .|.|.| ::||.:...|..::.|  ...||..|..:....|....|....|.....:
 Worm    95 LTEKRRRSVESFHRLHSKERKLEVKSRKKSR--TSSSSMEASTSCTFPARQTKTKRHKRKTYSTI 157

  Fly   759 ST-----SNSASAVRHLNNSTI----------YVD-DENRPKGHVVYFTAKRNLPPKMYKCHECS 807
            |:     |...:.:|::|.:.|          |.| ..|..:.|     .|:.:  |:.|.|.. 
 Worm   158 SSFAPHHSTICAELRNVNPARIADFRHPSIFEYSDMSLNERREH-----WKKEM--KVIKKHND- 214

  Fly   808 PNCLFKIVH----RLDSYSPLAKPLLSGWERLVMRQKTKKSVVYKGPCGKSLRSLA--------- 859
                .:::|    |.|....| .|.|:|:.|..|..:.....::     .::|.||         
 Worm   215 ----IRLMHEEAVRFDDIIEL-DPTLNGYYRRFMGAEQSTRALF-----MAVRCLATFGRNFYEE 269

  Fly   860 ------------EVHRYLRATENVLNV---------DNFDFTPDLKCLAEYSIDPSIVKDTDISK 903
                        |:.||.   |.::.|         |:...:.|...:..|         || :|
 Worm   270 PERDHGEEEIPEELDRYF---EKLIYVAPRTRIRITDDIHLSNDTHRIPVY---------TD-AK 321

  Fly   904 GQEKMAIPLVN--YYDNTLPPPCTYAKQRIPTEGVHLNLDEEFLLCCDC--ED---DCSDKSKCA 961
            |:....:.:.|  .||:.:.......|:.:..|.:.:....|.::.|.|  :|   :|.|...|.
 Worm   322 GETLKTVKIPNPLLYDHIINNMVDKVKEPLLYEAIKIAGSSENVIRCKCCSQDPVVNCFDNKDCP 386

  Fly   962 CW---QLTVAGVRYCNPKKPIEEIGYQYKRLHEHVPTGI----YECNSRCKCKKNCLNRVVQFSL 1019
            |:   |...:..:..:..:.::...:|....::..||..    :.|:.:|.||..|.|... :.:
 Worm   387 CFIANQFLQSRNKTTDTNEKLKFHTFQPLMYNDGNPTYYNTVGFACSPKCACKGACTNNAT-YLI 450

  Fly  1020 EMKL---QVFKTSNR-GWGLRCVNDIPKGAFICIYAGHL-----LTETMANEGGQ--DA-GDEYF 1072
            :.||   ::::...: |:|:|....||.|..|..|.|.|     |..::.|...|  |. ||::.
 Worm   451 QKKLYSIEIYRADPQIGFGIRSTLFIPAGTPIIEYCGELVDGERLHSSLENYSYQLTDCEGDKHL 515

  Fly  1073 ADLDYIEVAEQLKEGYESEVDHSDPDAEEDNGGPDAEDDDDFRPNYHYQRKIKRSSRSGSTQNSS 1137
            .:|        |:|.|::..::.|.                                        
 Worm   516 YNL--------LREKYKNNPEYYDV---------------------------------------- 532

  Fly  1138 TQSSELDSQERAVINFNPNADLDETVRENSVRRLFGKDEAPYIMDAKTTGNLGRYFNHSCSPNLF 1202
                                 |||..:.:            :.:|||..|::||:.||||:||:.
 Worm   533 ---------------------LDELSKHH------------FHLDAKMQGSVGRFANHSCTPNME 564

  Fly  1203 VQNVFVDTHDLRFPWVAFFSAAHIRSGTELTWNYNYEVGVVPGKVLYCQCGAPNCR 1258
            ...:|.:........:.||:...|..|..||.:|..|..|.  :...|.|....||
 Worm   565 PLRLFKEGFTPANMRMIFFTLKDIFPGEPLTLDYGSEYKVF--RRQRCLCRTFACR 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eggNP_611966.3 HMT_MBD 823..879 CDD:238689 15/85 (18%)
Pre-SET 901..1013 CDD:282838 24/125 (19%)
SET 1022..1239 CDD:214614 46/228 (20%)
set-6NP_510003.2 SET 455..603 CDD:214614 45/228 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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