DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eps-15 and rme-1

DIOPT Version :10

Sequence 1:NP_611965.2 Gene:Eps-15 / 37961 FlyBaseID:FBgn0035060 Length:1253 Species:Drosophila melanogaster
Sequence 2:NP_001367910.1 Gene:rme-1 / 179010 WormBaseID:WBGene00004373 Length:791 Species:Caenorhabditis elegans


Alignment Length:122 Identity:47/122 - (38%)
Similarity:60/122 - (49%) Gaps:14/122 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 GVANGDWSIGVIDRLKYEQLFESLHPSNGMLPGNKVKGVLMDSKLPMSILGTIWDLADQDKDGNL 185
            |....:|.:. .:|...:..||||.|.||.|.|...|..::.||||.|:||.:|.|||.||||.|
 Worm   678 GADEAEWVVS-RERTTADSTFESLGPVNGYLSGRAAKEHMVKSKLPNSVLGKVWKLADIDKDGQL 741

  Fly   186 DMHEFVVAMHLVYQTLQKRTIPSVLPPELRKPGGAGPPPKPAMPPPPAGAAMPRAPS 242
            |..||.:|.:|:...|:...|||.||..|             :||...|...|..||
 Worm   742 DADEFALANYLINLKLEGHEIPSELPKHL-------------IPPSKRGEQDPVYPS 785

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eps-15NP_611965.2 EH 16..82 CDD:238009
EH 126..215 CDD:197477 39/88 (44%)
EH 307..402 CDD:197477
SMC_prok_B <423..>632 CDD:274008
rme-1NP_001367910.1 EHD_N 255..287 CDD:465295
EHD 291..531 CDD:206740
DUF5600 519..625 CDD:465667
EH 683..776 CDD:197477 42/106 (40%)
Blue background indicates that the domain is not in the aligned region.

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