DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstE12 and GSTF6

DIOPT Version :9

Sequence 1:NP_001246500.1 Gene:GstE12 / 37960 FlyBaseID:FBgn0027590 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_001184893.1 Gene:GSTF6 / 839515 AraportID:AT1G02930 Length:208 Species:Arabidopsis thaliana


Alignment Length:200 Identity:50/200 - (25%)
Similarity:90/200 - (45%) Gaps:14/200 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SPPSRAVLLTAKAIGLDLELRPINLLKGEHLTPEFLKLNPQHTIPTLIDGEATIIDSHAICAYLV 76
            |..:|.||:......:|.|...:.|..|||....|:..||...:|...||:..|.:|.||..|:.
plant    12 STATRRVLIALHEKNVDFEFVHVELKDGEHKKEPFILRNPFGKVPAFEDGDFKIFESRAITQYIA 76

  Fly    77 EKYGQKEQQLYP--KELVQRANVDARLHLDSGHLFARL--RFLYEPIL--YYG-STDCSI--DKI 132
            .::..|...|..  |::   |.:...:.::| |.|..:  :.::|.:|  .|| :||.::  ::.
plant    77 HEFSDKGNNLLSTGKDM---AIIAMGIEIES-HEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEE 137

  Fly   133 AYIQKCWEILEGFLKDQPYLCGSDLTIADFCAVATVTSVNDTAPIDEF-KFPKMHAWLKRLAELP 196
            |.:.|..::.|..|.:..||.....|:.|...:..:..:..|.....| :.|.:.||:..:...|
plant   138 AKLAKVLDVYEHRLGESKYLASDHFTLVDLHTIPVIQYLLGTPTKKLFDERPHVSAWVADITSRP 202

  Fly   197 YYQEV 201
            ..|:|
plant   203 SAQKV 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstE12NP_001246500.1 GST_N_Delta_Epsilon 4..77 CDD:239343 21/64 (33%)
GstA 6..201 CDD:223698 49/198 (25%)
GST_C_Delta_Epsilon 92..210 CDD:198287 25/117 (21%)
GSTF6NP_001184893.1 GST_N_Phi 4..77 CDD:239351 21/64 (33%)
GST_C_Phi 91..208 CDD:198296 26/120 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 54 1.000 Domainoid score I4138
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 77 1.000 Inparanoid score I2398
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1231780at2759
OrthoFinder 1 1.000 - - FOG0000035
OrthoInspector 1 1.000 - - mtm975
orthoMCL 1 0.900 - - OOG6_100130
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X30
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.770

Return to query results.
Submit another query.