DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstE12 and VARS1

DIOPT Version :10

Sequence 1:NP_611964.1 Gene:GstE12 / 37960 FlyBaseID:FBgn0027590 Length:223 Species:Drosophila melanogaster
Sequence 2:XP_005249419.1 Gene:VARS1 / 7407 HGNCID:12651 Length:1265 Species:Homo sapiens


Alignment Length:192 Identity:45/192 - (23%)
Similarity:67/192 - (34%) Gaps:66/192 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LKGEHLTPEFLKLNPQHTIPTLID---------GEATIIDSHAICAYLVEKYGQKEQQLYPKELV 92
            |||:::...||    ..::|.:.|         |...|..:|             :|..|  |:.
Human   560 LKGKNVIHPFL----SRSLPIVFDEFVDMDFGTGAVKITPAH-------------DQNDY--EVG 605

  Fly    93 QRANVDARLHLDS-GHLF----------------ARLRFLYEPILYYGSTD-------CSIDKIA 133
            ||..::|...:|| |.|.                |.|..|.|..|:.|..|       |:..|  
Human   606 QRHGLEAISIMDSRGALINVPPPFLGLPRFEARKAVLVALKERGLFRGIEDNPMVVPLCNRSK-- 668

  Fly   134 YIQKCWEILEGFLKDQPYL-CGSDLTIADFCAVATVTSVNDTAPIDEFKFPKMHAWLKRLAE 194
                  :::|..|:.|.|: ||.....|.    |.||. .|...:.|......|||:..:.|
Human   669 ------DVVEPLLRPQWYVRCGEMAQAAS----AAVTR-GDLRILPEAHQRTWHAWMDNIRE 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstE12NP_611964.1 GST_N_Delta_Epsilon 4..77 CDD:239343 10/48 (21%)
GST_C_Delta_Epsilon 92..210 CDD:198287 32/128 (25%)
VARS1XP_005249419.1 GST_C_ValRS_N 92..213 CDD:198327
PTZ00419 283..1265 CDD:240411 45/192 (23%)
Blue background indicates that the domain is not in the aligned region.

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