DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstE12 and eEF1gamma

DIOPT Version :9

Sequence 1:NP_001246500.1 Gene:GstE12 / 37960 FlyBaseID:FBgn0027590 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_001189308.1 Gene:eEF1gamma / 44791 FlyBaseID:FBgn0029176 Length:431 Species:Drosophila melanogaster


Alignment Length:214 Identity:48/214 - (22%)
Similarity:83/214 - (38%) Gaps:22/214 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKPALYYATLSPPSRA--VLLTAKAIGLDLELRPINLLKGE-HLTPEFLKLNPQHTIPTLIDGE 62
            |.|..||  |.....||  .|:.|:..|..:::.. |...|| :.:.||||..|...:|.....|
  Fly     1 MVKGTLY--TYPENFRAYKALIAAQYSGAQVKVAD-NFKFGETNKSAEFLKKFPGGKVPAFETAE 62

  Fly    63 ATIIDSHAICAYLVEKYGQKEQQLYPKELVQRANVDARLHL-DSGHLFARLRFLYEPIL----YY 122
            ...:......|||:    ..||....|....:|.|...:.. |:..:.|...::: |:|    ..
  Fly    63 GQYLSESNAIAYLL----ANEQLRGGKCPFVQAQVQQWISFADNEIVPASCAWVF-PLLGILPQQ 122

  Fly   123 GSTDCSIDKIAYIQKCWEILEGFLKDQPYLCGSDLTIADFCAVATVTSVND--TAPIDEFKFPKM 185
            .::....:..|.:|:    |...|:|..:|.|..:|:||....:::..:.:  ..|.....|..:
  Fly   123 KNSTAKQEAEAVLQQ----LNQKLQDATFLAGERITLADIVVFSSLLHLYEYVLEPSVRSAFGNV 183

  Fly   186 HAWLKRLAELPYYQEVNGD 204
            :.|...:......|.|..|
  Fly   184 NRWFVTILNQKQVQAVVKD 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstE12NP_001246500.1 GST_N_Delta_Epsilon 4..77 CDD:239343 21/75 (28%)
GstA 6..201 CDD:223698 44/204 (22%)
GST_C_Delta_Epsilon 92..210 CDD:198287 22/120 (18%)
eEF1gammaNP_001189308.1 GST_N_EF1Bgamma 4..79 CDD:239342 21/81 (26%)
GstA 5..187 CDD:223698 42/193 (22%)
GST_C_EF1Bgamma_like 90..209 CDD:198290 22/118 (19%)
EF1G 271..376 CDD:279041
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45459957
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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