DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstE12 and Clic1

DIOPT Version :10

Sequence 1:NP_611964.1 Gene:GstE12 / 37960 FlyBaseID:FBgn0027590 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_001002807.1 Gene:Clic1 / 406864 RGDID:1303043 Length:241 Species:Rattus norvegicus


Alignment Length:172 Identity:31/172 - (18%)
Similarity:54/172 - (31%) Gaps:76/172 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 KLNPQHTIPTLIDGEATIIDSHAICAYLVEKYGQKEQQLYPKELVQRANVDARLHLDSGHLFARL 112
            ||.|...:|.|:.|.....|::.|..:|       |..|.|....:.|.::...:.....:||:.
  Rat    57 KLCPGGQLPFLLYGTEVHTDTNKIEEFL-------EAVLCPPRYPKLAALNPESNTSGLDIFAKF 114

  Fly   113 RFLYEPILYYGSTDCSIDKIAYIQ---------------KCWEILEGFL---------------- 146
            .                   |||:               |..::|:.:|                
  Rat   115 S-------------------AYIKNSNPALNDNLEKGLLKALKVLDNYLTSPLPEEVDETSAEDE 160

  Fly   147 --KDQPYLCGSDLTIADFCAVATVTSVNDTAPIDEFKFPKMH 186
              ..:.:|.|::||:|| |.:                .||:|
  Rat   161 GISQRKFLDGNELTLAD-CNL----------------LPKLH 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstE12NP_611964.1 GST_N_Delta_Epsilon 4..77 CDD:239343 9/28 (32%)
GST_C_Delta_Epsilon 92..210 CDD:198287 19/128 (15%)
Clic1NP_001002807.1 Required for insertion into the membrane. /evidence=ECO:0000250 2..90 11/39 (28%)
O-ClC 6..241 CDD:129941 31/172 (18%)
G-site. /evidence=ECO:0000250|UniProtKB:O00299 24..27
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.