DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstE12 and se

DIOPT Version :9

Sequence 1:NP_001246500.1 Gene:GstE12 / 37960 FlyBaseID:FBgn0027590 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_648235.1 Gene:se / 38973 FlyBaseID:FBgn0086348 Length:243 Species:Drosophila melanogaster


Alignment Length:227 Identity:58/227 - (25%)
Similarity:88/227 - (38%) Gaps:64/227 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LYYATLSPPSRAVLLTAKAIGLDLELRPINLLKGEHLTPEF-LKLNPQHTIPTL----IDGEATI 65
            ||.....|.::.|.|...|..:......|||..    .||: |:.|||..:|.|    ..|...:
  Fly    24 LYSMRFCPFAQRVHLVLDAKQIPYHSIYINLTD----KPEWLLEKNPQGKVPALEIVREPGPPVL 84

  Fly    66 IDSHAICAYLVEKYGQKEQQLYPKELVQRANVDARLHL--------------DSGHL--FARLRF 114
            .:|..||.||.|:|..:  .|||::.:::  |..:|.:              |.|.|  |.....
  Fly    85 TESLLICEYLDEQYPLR--PLYPRDPLKK--VQDKLLIERFRAVLGAFFKASDGGDLEPFWSGLD 145

  Fly   115 LYEPIL------YYGSTDCSIDKIAYIQKCW-EILEGFLKDQPYLCGSDLTIADFCAVATVTSVN 172
            :||..|      ::|.....|  :.|:...| |.|| .||.|.   |.|..              
  Fly   146 IYERELARRGTEFFGGEQTGI--LDYMIWPWCERLE-LLKLQR---GEDYN-------------- 190

  Fly   173 DTAPIDEFKFPKMHAWLKRL----AELPYYQE 200
                .|:.:||::..||:|:    |.:.:|.|
  Fly   191 ----YDQSRFPQLTLWLERMKRDPAVMAFYME 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstE12NP_001246500.1 GST_N_Delta_Epsilon 4..77 CDD:239343 23/75 (31%)
GstA 6..201 CDD:223698 58/227 (26%)
GST_C_Delta_Epsilon 92..210 CDD:198287 30/136 (22%)
seNP_648235.1 GST_N_Omega 3..95 CDD:239353 22/74 (30%)
GstA 22..215 CDD:223698 56/222 (25%)
GST_C_Omega 109..229 CDD:198293 30/136 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460170
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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